Rhodococcus jostii: RHA1_ro01838
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Entry
RHA1_ro01838 CDS
T00382
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
rha
Rhodococcus jostii
Pathway
rha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RHA1_ro01838 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rha03400
]
RHA1_ro01838 (recC)
Enzymes [BR:
rha01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RHA1_ro01838 (recC)
DNA repair and recombination proteins [BR:
rha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RHA1_ro01838 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ABG93649
UniProt:
Q0SFN7
LinkDB
All DBs
Position
complement(1944366..1947626)
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AA seq
1086 aa
AA seq
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MLVLHRAERSTTLASALGDVLATPLSDPFAREVVAVPAKGVERWLTQRLSTALGARPGVG
DGVAANIDFPSPTRLVDECLAAATGVSADDDPWNPSRVLWALLGVVDDCLSEPWCAVLAK
HLGHGLPDRDPDDHRPGRRYATASHLTDLFRSYAAQRPAMLVDWAGGRDTDGAGGPLDDD
LLWQAELWRRLREKIGSPAPAERLDSACARLRAEPDLVELPARLSLFGPTRLATDQIAVL
AALAVNRDVHLWLPHPSPTMWSSLSTADSVLARADDPTALSVAHPLLSSLARDVRELESR
LTRLDVDDLHHEGPAPRDSLLGCLQADVRDDRAPALAECTADTSVQVHACHGPARQVEVL
RECLLHLFEDDPTLEPRDVLVMCPDVESYAPLIRAAFGQDVLGHPGHRLRVRLADRALHQ
TNPVLAVVSTLLELADARVTASQVLDLSAAAPVRRRFRFGDDDLERIREWATATGARWGI
GPRQRAAFGLGDFPQNTFTTALDRILLGAAADESDGEWLALALPLDDVDSNDIDLTGRLA
EFVDRLDVALRGLGGPQSVADWSSALTRALDLLVDVSAADTWQLAQARRELGSAMEHGGD
AVLRLSDVRAMLATRLAGRPTRANFRTGELTVCTMVPMRSVPHRVVVLLGLDDEVFPRGV
SVDGDDVLARNPLLGERDPRSEDRQLLLDAVMSASEKLLLFYTGADPVTGMSRPPAIPLS
ELLDAVAATVGSDALPGIVTRHPLQPFDARNFRPEHPFSFDRAALAGARAAQHPPEPEPA
FLPAPLVPPPLGDVDLADLIAFLVHPTQAFLRQRLGLRVPDVDEDLADALEVSPDPLARW
DLGQRMLVARLTGVELADFRAAEWRRGTLPPFKLGESVLGGIEHAVESLVAVSGSVHVGR
AETVDVDVDLGSGRRLTGTVGGVHGSVIATTTYSKLGPKHRLAAWAQLLAVAASDNETEW
TAVTTGRGAYSRPAWRSTLTAPENALEELVRLVELRDLGLHAPLPIATGASAAYAERRHG
GSSMEDAIEAARKEWSSDFGDSRDRHITYVYGSSPGIDVLGDAVTIENYARQLWAPLLAA
ETLAQP
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgtactgcatcgcgccgagcgttccaccactctcgcgtcggctctcggcgacgtg
ctcgcgaccccgctgtccgatccgttcgcccgggaggtcgtggctgtcccggcgaagggg
gtggagcgctggctcacacagcggctctcgaccgcgctcggtgcccggcccggcgtcggc
gacggggtggccgcgaacatcgacttcccgtcaccgacccggctcgtcgacgagtgcctc
gccgccgccaccggggtgtccgccgacgacgatccgtggaatccgtcccgggtgctgtgg
gcgttgctcggcgtcgtcgacgactgcctcagtgagccctggtgcgccgtcctcgcgaaa
cacctcgggcacggtctcccggaccgcgacccggacgatcaccggccgggccggcgctac
gccaccgcgtcacacctcaccgatctgttccgcagctacgccgcgcagcggccggcgatg
ctggtcgactgggccggtggtcgcgacaccgacggtgcgggcggtccactcgacgacgac
cttctctggcaggccgaactgtggcggcggctgcgcgagaagatcggcagccccgctccc
gccgagcggctcgactccgcctgcgcccggctgcgcgcggaaccggatctcgtcgaactc
cccgcccgattatcactgttcggtccgacgcggctcgcgaccgatcagatcgccgtcctc
gccgccctcgccgtcaatcgtgatgtgcacctgtggcttccgcatccgagtcccaccatg
tggtcgtcgttgtcgacggcggacagcgtgctcgcacgtgccgacgaccccaccgcgctg
tccgtcgcccacccgctgctgtcgagcctggcgcgggacgtccgcgaactcgagtcgagg
ctgacccgcctcgacgtcgacgacctccaccacgaggggcctgcgccccgcgactccctg
ctggggtgcctccaggcggatgtccgggacgaccgggcgcccgcgctcgccgaatgcacg
gccgacacctccgtccaggtccacgcctgtcacggaccggcccgccaggtggaggtcctg
cgcgaatgcctcctacatctcttcgaggacgatccgactctcgaaccgcgtgacgtgctc
gtcatgtgccccgacgtcgagtcgtacgccccgctgatccgggcggcgttcgggcaggac
gtgctcgggcatcccggccatcgtctgcgggttcggctcgcggaccgtgccctgcaccag
accaatccggttctcgccgtggtgtcgactctcctcgaactcgccgacgcgagggtgacg
gcgagccaggtcctcgacctgtcggcggccgcgccggtgcgcaggcggttccggttcggc
gacgacgacctcgaacggatccgggagtgggcgaccgcgacaggagcccgctggggaatc
ggtccgcggcagcgcgcggcgttcggtctcggcgacttcccgcagaacacgttcaccacc
gcgctcgaccgcatcctgctcggtgccgccgccgacgagtccgacggcgaatggctcgcc
ctggcgctgccgctcgacgacgtcgacagcaacgacatcgacctcaccggtcggctcgcc
gaattcgtcgaccggctcgacgtcgcgctgcgcgggctcggcgggccgcagtcggtcgcg
gactggtcgagcgcgctcacccgggcactcgatctgctcgtcgacgtcagcgccgccgac
acgtggcaactcgcgcaggcgcgacgagaactcgggtcggcgatggagcacggcggcgac
gcggtcctgcgactgtcggacgtgcgcgcgatgctggccacccggctcgcgggccgcccc
acccgcgcgaacttccgcaccggcgagctgacggtgtgcaccatggtgccgatgcggtcg
gtgccgcaccgcgtggtcgttctcctcggcctcgacgacgaagtgttcccgcgcggggtg
agcgtggacggcgacgacgtgctggcccgtaatccgcttctcggcgaacgcgacccgcgc
agcgaggaccggcagttgctgctcgacgccgtgatgtcggcgagtgagaaactcctgctg
ttctatacgggcgccgaccccgtcaccggcatgtcccggccgccggcgatcccgctgtcc
gaattgctcgacgcggtggcggccaccgtcgggagcgacgccctgcccggtatcgtgacc
cggcatccgttgcagccgttcgatgcacgcaacttccggcccgagcacccgttcagtttc
gatcgggcggcgctggccggtgcccgtgccgcgcagcacccgcctgaaccggagcccgca
ttcctgccggcaccgttggtgccgccgcccctcggggacgtcgatctcgcggacctcatc
gcgttcctggtgcacccgacgcaggcgtttctgcggcaacggctggggctgcgggtccct
gacgtggacgaggacctcgccgacgcactggaggtgtcgcccgatccgctggcccggtgg
gatctcggccagaggatgctcgtcgcgaggctgacgggagtcgaactggccgacttccgc
gccgcggagtggcgccgcgggacgttgccgccgttcaagttgggggagtcggtgctcggt
ggaatcgagcacgcggtcgagtcgctcgtcgccgtcagcgggtccgtgcatgtcgggcgg
gcggaaaccgtggacgtcgatgtcgatctcggttccggacggcgcctcaccggcaccgtc
ggcggggtgcacgggtcggtgatcgcgaccaccacgtattcgaagttggggccgaaacac
cgcctcgccgcctgggcgcaattgctggcggtcgcggcgtccgacaacgagaccgaatgg
actgccgtgacgaccggccgcggcgcgtacagccgtccggcgtggcgctcgacccttacc
gcacccgagaacgcactggaggagttggtgcgactcgtcgaactgcgcgatctggggctg
cacgcgccgttgccgatcgccacgggcgcgtcggcggcgtatgccgaacgacgccacggc
ggcagcagcatggaggacgcgatcgaggcggcccggaaggaatggagcagtgacttcggt
gactcacgcgaccggcacatcacgtacgtgtacgggtcctcaccgggcatcgacgtcctc
ggcgacgcggtgaccatcgagaactacgcccggcaactgtgggcgccgctgctcgccgcc
gagacgttggcgcagccgtga
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