Rhodococcus jostii: RHA1_ro02118
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Entry
RHA1_ro02118 CDS
T00382
Name
(GenBank) sigma factor, sigma 70 type, group 3
KO
K03090
RNA polymerase sigma-B factor
Organism
rha
Rhodococcus jostii
Brite
KEGG Orthology (KO) [BR:
rha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rha03021
]
RHA1_ro02118
Transcription machinery [BR:
rha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RHA1_ro02118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
MarR
HTH_Crp_2
DUF7343
HTH_3
MarR_2
HTH_24
HTH_23
GerE
HTH_31
Sigma70_ECF
KORA
HNF-1_N
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
ABG93925
UniProt:
Q0SEW1
LinkDB
All DBs
Position
2224949..2225746
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AA seq
265 aa
AA seq
DB search
MTSHTHSGGHTARWPDEYQDVTALFEQMAALDEDDPRRSRLRDAVVTRCLPLAEHIARRF
DGRGEAHDDLVQVARLGLVNSVDRFDVERGSDFVSFAVPTIMGEVRRHFRDTGWAVRVPR
RMKELHLALSQAVAELSQSLGHAPTVSELAEHLDLEQEEVAQGLLAGNAYQTVSVDNTSS
DRTGELSMVETLGDYDAAMDDVENHETLRPLLQSLPERERTVLMLRFFGNMTQTQIADRV
GISQMHVSRLLAKTLASLRDQLGDA
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtcccatactcacagtggggggcacacggcccgttggccggacgagtatcaggac
gtcacagcactcttcgaacagatggcagccctcgacgaggacgatccccggcgcagcaga
ctgcgtgacgccgtcgtgacgcgctgcctcccgctcgccgagcacatcgctcgccgtttc
gacggccgcggcgaggcgcacgacgatctggttcaggtcgcgcgcctcggcctggtcaac
tcggtcgaccggttcgacgtggagcggggatccgacttcgtgtcgttcgcggtccccacc
atcatgggcgaggtacgacggcacttccgcgacaccgggtgggccgtgcgggtgccccgc
cggatgaaggaactgcacctcgcgctgagccaggccgtcgccgaactgtcccagagtctc
ggccacgcgcccaccgtcagcgaactcgccgaacatctggacctcgaacaggaggaggtg
gcgcaggggctcctcgccggcaacgcgtaccagacggtctccgtcgacaacacgtcgtcg
gaccggacaggcgagctgtccatggtggagacactcggcgactacgacgccgcgatggac
gacgtcgagaaccacgaaaccctgcgccccctgctccaatcgctgcccgaacgggagcgg
accgtcctcatgctgcgattcttcggcaacatgacacagactcagatcgccgaccgggtc
ggtatctcgcagatgcacgtgtcccggttgctggcgaagacactggcatcactgcgagat
caactcggtgacgcgtag
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