Rhodococcus jostii: RHA1_ro04170
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Entry
RHA1_ro04170 CDS
T00382
Name
(GenBank) bifunctional ABC lipid A exporter
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
rha
Rhodococcus jostii
Pathway
rha02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rha00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RHA1_ro04170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rha02000
]
RHA1_ro04170
Transporters [BR:
rha02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RHA1_ro04170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_30
AAA_22
SMC_N
AAA_16
AAA
AAA_23
NB-ARC
T2SSE
NTPase_1
AAA_25
EI24
TsaE
RsgA_GTPase
DUF87
DO-GTPase2
MMR_HSR1
SRP54
nSTAND3
AAA_29
cobW
HUTI_composite_bact
AAA_14
ATP_bind_1
AAA_5
Motif
Other DBs
NCBI-ProteinID:
ABG95963
UniProt:
Q0S923
LinkDB
All DBs
Position
4378651..4380630
Genome browser
AA seq
659 aa
AA seq
DB search
MSDRATTTTAERPAGPRIPGPVAPGAPGSKPNDLWPSTKRLLRRLGPHRIAVGIVILVAA
VSVVLTSIAPRMLGQGTNLIFDGIIGAQLPAGMSKDQAVAALRADGQNTFADMVSGMAVV
PGVGIDFSALGRVLAIVLALYLGSAVFMWLSGFLLNIIVQGVVKNLRAEVERKIHRLPLR
YFDSHSRGDLLSRVTNDIDNVSQSLQQTMSQLIVSAMTVIGILVMMIVISPLLALIAVLT
VPLSILVTAQIAKRSKTHFVSQWKSTGALNSHVEEAYTGHELVTVFGRSREVEARFEEQN
EALYQASYRAQFISGLIMPAIMFLGNLNFVAIAVLGGMRVASGTMSLGDVQAFIQYSRQF
TQPLTQIGAMVNLMQSGVASAERVFAILDEDEEEPDLAEAPTPAEPRDAGRVHTFGRVEF
SDVSFSYSPEKPLIENLSLVAEPGQMVAIVGPTGAGKTTLVNLILRFYELDGGKILLDGV
DTAEMSRDDLRSRIGMVLQDAWLFGGTIRDNIAYGRPDATEDEIQAAARISYVDRFVHSL
PDGYDTVIDEEGSNISAGEKQLITIARAFISQPSILILDEATSSVDTRTELLVQHATAVL
RSDRTSFVIAHRLSTIRDADLIVVMEDGRIVEQGSHDDLLLTRGAYYRLYNSQFVGAEV
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcgcgcaaccaccaccactgccgaaaggcccgccggcccgcgtattccagga
ccggtcgctccgggtgccccggggtccaagccgaacgacctgtggccgtccaccaagcgg
ctgctgaggcggctgggtccccaccggatcgccgtcggcatcgttatcctggtcgctgcc
gtgtcggtggtgctcacctcgatcgcgccgcggatgctcggtcagggcacgaacctgatc
ttcgacggcatcatcggcgcgcagttgcccgccgggatgtcgaaggatcaggccgtagcc
gcgttgcgggccgacggtcagaacacgttcgccgacatggtgtccggcatggccgtcgtg
cccggtgtcggaatcgacttcagtgcgctcggccgggtgctggcgatcgtgctggccctg
tacctggggtcggcggtgttcatgtggctgtcgggtttcctgctgaacatcatcgtgcag
ggtgtcgtgaagaatctgcgcgccgaggtcgaacggaagatccatcgacttccgctgcgc
tacttcgactcccactcccgcggcgacctgctgagccgggtcaccaacgacatcgacaac
gtctcgcagtcgttgcagcagacgatgagtcagctgatcgtgtcggcgatgacggtgatc
ggcatcctcgtgatgatgatcgtcatctcgccgctgctcgccttgatcgcggtgctgacg
gtgccgctgtcgatcctggtgaccgcgcagatcgcgaaacggtccaagacccacttcgtg
tcgcagtggaagtcgacgggagcgctcaactctcacgtggaggaggcgtacacgggccac
gaactggtcaccgtgttcggccgcagccgcgaggtggaggcccggttcgaggagcagaac
gaggcgctctaccaggccagttaccgggcccagttcatctcgggcctgatcatgccggcg
atcatgttcctcggaaatctcaacttcgtggccatcgccgtgctcggtggcatgcgggtg
gcgtccggcacgatgagcctcggcgacgtgcaggcgttcatccagtactcgcgccagttc
acccagcccctcacccagatcggggccatggtcaacctcatgcagtcgggtgtggcgtcc
gccgagcgggtgttcgccatcctcgacgaggacgaggaggaacccgacctcgccgaagcg
cccacgccggccgagccccgtgatgcgggtcgcgtccatacgttcggccgggtggagttc
tcggacgtgtcgttcagctactcgccggagaagccgctgatcgagaacctgtcgctggtg
gcggaacccggtcagatggtcgccatcgtcggacccaccggcgccggcaagaccacactc
gtcaacctgatcctgcggttctacgaactcgacggcggcaagatcctcctcgacggcgtc
gacaccgccgagatgtcgcgcgacgacctgcggtcccgcatcggcatggtgctgcaggac
gcctggttgttcggcggcaccatccgcgacaacatcgcgtacggacgtcccgacgccacc
gaggacgagatccaggcggccgcacgaatcagctacgtcgaccggttcgtccactcgctg
cccgacggctacgacaccgtcatcgacgaagagggcagcaacatcagcgccggtgagaag
cagctgatcaccatcgcccgcgcgttcatctcgcagccgtcgatcctgatcctcgacgag
gcaaccagttccgtcgacacccgcaccgagttgctcgtgcagcacgccacggcggtcctg
cgcagcgatcgcacgagtttcgtgatcgcacaccgcttgtcgaccatccgcgacgccgac
ctcatcgtcgtcatggaggacggtcgcatcgtcgagcagggcagccacgacgacctgctc
ctcacccgcggcgcgtactaccgcctctacaacagccagttcgtcggcgccgaagtctga
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