Rhodococcus jostii: RHA1_ro04543
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Entry
RHA1_ro04543 CDS
T00382
Symbol
gabD3
Name
(GenBank) succinate-semialdehyde dehydrogenase (NAD(P)+)
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
rha
Rhodococcus jostii
Pathway
rha00250
Alanine, aspartate and glutamate metabolism
rha00310
Lysine degradation
rha00350
Tyrosine metabolism
rha00650
Butanoate metabolism
rha00760
Nicotinate and nicotinamide metabolism
rha01100
Metabolic pathways
rha01120
Microbial metabolism in diverse environments
Module
rha_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
rha00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RHA1_ro04543 (gabD3)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RHA1_ro04543 (gabD3)
00310 Lysine degradation
RHA1_ro04543 (gabD3)
00350 Tyrosine metabolism
RHA1_ro04543 (gabD3)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
RHA1_ro04543 (gabD3)
Enzymes [BR:
rha01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
RHA1_ro04543 (gabD3)
1.2.1.20 glutarate-semialdehyde dehydrogenase
RHA1_ro04543 (gabD3)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
RHA1_ro04543 (gabD3)
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Gene cluster
GFIT
Motif
Pfam:
Aldedh
DUF2188
DUF3102
Motif
Other DBs
NCBI-ProteinID:
ABG96329
UniProt:
Q0S807
LinkDB
All DBs
Position
complement(4787475..4788923)
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AA seq
482 aa
AA seq
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MLEEAAIASVQTGLFIGGKWRDSARTMPVHDPSNGQILCTVADADAAEAREALDAAVAAQ
PSWAATTPRERSTILMNAHRLLLENVDRLALVMTLEMGKPLTEARGEIAYAAEFFRWFAE
EAVRIDGGYMTAPGGGSRFLVTRQPVGPSLLITPWNFPMAMGTRKIGPAIAAGCTSVIKP
AAQTPLSILALADILTEAGLPDGVVNVVTTSSPDEVITPLILDGRARKLSFTGSTKVGKH
LLELCARTVMRTSMELGGNAPFLVFDDANLDDAVDGAMAAKMRNIGQACTAANRILVHSS
VAEEFTRKLTQRMEALPVGRGTEDGVVVGPLIDEAAVAKVSSLVADAVERGASVLTGGEA
LDRPGNFYPATVLTGVPDDAEMCHNEIFGPVAAISTFETEAEAVERANDTPYGLVAYVYT
DSLKRGIRVCEALESGMVGLNQGVVSNPAAPFGGVKESGLGREGGTTGIDEFLETKYIGV
AV
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaggaagcagcaatcgcatcggtgcagaccggcctgttcatcggcggcaagtgg
cgcgacagcgcccgcaccatgccggtccacgacccgtccaacggacagatcctgtgcacg
gtcgccgacgccgacgccgcggaggcccgcgaggcgctcgacgcggcggtggcggcgcaa
ccgtcgtgggcggccacgacaccccgcgaacgcagcaccatcctcatgaacgcacaccga
cttctgctcgagaacgtcgaccggctcgcgctggtcatgacgctcgagatgggcaagccc
ctcaccgaggctcggggtgaaatcgcctacgccgcagagttcttccgctggttcgcggag
gaggccgtccgcatcgacggcggctacatgacggcgcccggcggcgggtcgcggtttctc
gtgacccgtcagcccgtggggccgagcctgctcatcaccccgtggaacttcccgatggcg
atgggcacccggaagatcgggcccgcgatcgccgccgggtgcacgtccgtcatcaagccg
gcggcccagacgccgctgtcgatcctggcgctcgccgacatcctcaccgaggccgggctg
ccggacggcgtcgtcaacgtcgtcaccacgtccagccccgacgaggtcatcactcccctc
atcctcgacggcagggcccgcaagctgtcgttcaccggttccaccaaggtcgggaaacat
ctgctcgaactgtgcgcgcgcacggtcatgcgcacatccatggaactcggcggcaacgcg
ccgttcctcgtcttcgacgacgcgaatctcgacgacgccgtcgacggggccatggcggcg
aagatgcgcaacatcggccaggcctgcacagctgccaaccgaatcctcgtgcacagttcg
gtcgccgaagaattcacacgcaaactcacacagcggatggaggccctgcccgttgggcgc
ggcacggaggacggcgtcgtggtcggaccgctgatcgacgaggcggccgtcgcgaaggtg
agcagtctcgtcgcggacgcggtcgaacgcggcgcctcggtgctcaccggcggcgaggca
ctcgaccgcccgggcaacttctacccggcgacagtcctgactggtgtgcccgacgacgcg
gagatgtgccacaacgagatcttcggtccggtggccgcgatcagcacgttcgagaccgag
gccgaggccgtcgagcgggccaacgacaccccgtacgggctggtggcctacgtgtacacc
gacagcctcaagcgcggcatccgcgtgtgcgaggcgctggagtcgggcatggtcggcctc
aaccagggtgtggtgtcgaatccggccgcgccgttcggcggcgtgaaggaatccggactc
gggcgcgaaggcggaaccaccggcatcgacgaattcctcgagacgaagtacatcggcgtc
gccgtctag
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