Rhodococcus jostii: RHA1_ro04600
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Entry
RHA1_ro04600 CDS
T00382
Name
(GenBank) possible ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
rha
Rhodococcus jostii
Pathway
rha04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
RHA1_ro04600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rha03019
]
RHA1_ro04600
03009 Ribosome biogenesis [BR:
rha03009
]
RHA1_ro04600
04131 Membrane trafficking [BR:
rha04131
]
RHA1_ro04600
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rha04147
]
RHA1_ro04600
Messenger RNA biogenesis [BR:
rha03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
RHA1_ro04600
Ribosome biogenesis [BR:
rha03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
RHA1_ro04600
Membrane trafficking [BR:
rha04131
]
SNARE
SNARE associated proteins
Others
RHA1_ro04600
Autophagy
Aggrephagy
Other aggrephagy associated proteins
RHA1_ro04600
Exosome [BR:
rha04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RHA1_ro04600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Acetyltransf_1
Acetyltransf_7
AAA_28
AAA_16
AAA_5
AAA_22
Acetyltransf_6
AAA_14
Acetyltransf_10
RuvB_N
AAA_33
SH3_Rv0428c
AAA_18
SKI
TIP49
AAA_17
AAA_lid_3
RNA_helicase
ATPase_2
TsaE
nSTAND3
AAA_24
NACHT
AAA_30
AAA_11
AAA_19
IPT
AAA_2
ABC_tran
Cytidylate_kin
IstB_IS21
Mg_chelatase
FR47
bpMoxR
Parvo_NS1
KTI12
Motif
Other DBs
NCBI-ProteinID:
ABG96386
UniProt:
Q0S7V0
LinkDB
All DBs
Position
complement(4852493..4853755)
Genome browser
AA seq
420 aa
AA seq
DB search
MDAWSIRDFEPEDLESVVRMDSSSTTTDQPPLFALSDVVGSLLNRHPAVVATKDGLIIGT
AVARVDEDRAWVMRLSLDPEWRAQGLGSALLSQLEHQLLARGVRRVSALLPEGETGATAL
SNSGFTARSGVTYYEKLGTVSPRTAGVLATLGGAVPPAGLWKQVAGMSREKSLIERKIVL
PLSRPALAADHGVAPPRAVVLFGPPGTGKTTFARAIASRLGWPFVELFPSRLAAGENGLA
AGLGEAFTSMGELEHVVVFIDEVEEVAARRRPGSQSVGVVNELLKSIVHFRERGGRLLVC
ATNSVRALDDAFLRHGRFDYVLPIGAPDAEARHALWERYLGNEQVDVSALVAATEGYTPA
DVAHAARTVAQATFECSVDSGGRCHAGTQDYLDVIGTVRPTLTAEMMQAFTEDIAGHART
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctggagcatccgagacttcgaaccggaggatctcgagtccgtcgtgcgcatg
gacagcagttccaccaccacagaccaaccgcccctgttcgcgctgtcggacgtggtcgga
agtctgctgaaccgtcacccggcggtcgtcgcgacgaaggacggtctcatcatcgggacg
gcggtcgctcgcgtcgatgaggaccgcgcctgggtcatgcgcctctccctcgatcccgaa
tggcgtgcccaagggctcggcagcgccctgctgtcgcagctcgagcaccagctcctcgcc
agaggagtgcggcgggtgagcgcgctcctccccgaaggtgagaccggtgccaccgcgctg
agcaattccggattcaccgcccgcagcggagtcacgtactacgagaagctcgggacggtg
tcgccccgtacggccggggtcctggcgacgctcggcggcgcggtaccgcccgccggactg
tggaaacaggtcgccggcatgtctcgggagaagtcgctgatcgaacgcaagatcgtgctc
cccctgtcgcggcccgcgctggccgccgaccacggcgtggcaccgccgcgcgccgtggtc
ctgttcggaccaccgggaaccgggaagacgacgttcgcgcgtgccatcgccagccggctc
ggctggccgttcgtcgaactgttcccgtcgcggctcgcggccggcgagaacggtctcgct
gccggtctcggcgaggcgttcacgtcgatgggcgaactcgagcacgtcgtcgtcttcatc
gacgaggtggaggaggtggcggcgcggcgcaggcccggatcgcagtcagtcggggtggtg
aacgaactgctgaaatcgatcgtccacttccgtgaacgcggcggacggttgctggtgtgc
gccaccaattccgttcgcgcactggatgatgcgttcctacgtcacggacgtttcgactat
gtgctgccgatcggcgcgccggacgcggaggcccggcacgcactgtgggagcggtacctc
ggcaacgagcaggtcgacgtgtccgccctcgtcgccgcgaccgagggttacacgcccgcc
gacgtcgcgcacgcggcacggaccgttgcgcaggcgacgttcgagtgcagcgtcgactcg
gggggacgctgccatgccggtacccaggactacctggacgtgatcggcacggtgcgtccc
accctcaccgccgagatgatgcaggcgttcacggaggacatcgccggtcacgcccgcacc
tga
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