Rhodococcus jostii: RHA1_ro05568
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Entry
RHA1_ro05568 CDS
T00382
Symbol
gabD4
Name
(GenBank) succinate-semialdehyde dehydrogenase (NAD(P)+)
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
rha
Rhodococcus jostii
Pathway
rha00250
Alanine, aspartate and glutamate metabolism
rha00310
Lysine degradation
rha00350
Tyrosine metabolism
rha00650
Butanoate metabolism
rha00760
Nicotinate and nicotinamide metabolism
rha01100
Metabolic pathways
rha01120
Microbial metabolism in diverse environments
Module
rha_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
rha00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RHA1_ro05568 (gabD4)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RHA1_ro05568 (gabD4)
00310 Lysine degradation
RHA1_ro05568 (gabD4)
00350 Tyrosine metabolism
RHA1_ro05568 (gabD4)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
RHA1_ro05568 (gabD4)
Enzymes [BR:
rha01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
RHA1_ro05568 (gabD4)
1.2.1.20 glutarate-semialdehyde dehydrogenase
RHA1_ro05568 (gabD4)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
RHA1_ro05568 (gabD4)
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GFIT
Motif
Pfam:
Aldedh
DUF3102
Motif
Other DBs
NCBI-ProteinID:
ABG97348
UniProt:
Q0S538
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All DBs
Position
5987839..5989305
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AA seq
488 aa
AA seq
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MMDVMDAVELMRTVPTTLFLGGEKRDAENGATFTVFDPATGDALTEVADASPADAMKALD
AAVAVQREWAATPARERGELLRAVFEKITARADDFALLMTLEMGKALPESAAEVKYGAEF
FRWFSEEAVRIAGRYTPAPAGNGRILVTKQPVGPCLAITPWNFPLAMGTRKIGPALAAGC
TMIVKPASETPLTMLLLAEVMADAGLPKGVLSVLPTSKSGEVTGPLLDDPRLRKLTFTGS
TGVGRMLVEKSAKGLLRTSMELGGNAPFVVFDDADVDKAVAGAVLAKMRNGGEACTAANR
FHVANSVREEFTAKLVDKLSSYTLGPGTDPGTTLGPLINADQLEKVGELVQDAVGAGARV
RLGGVAPEGPGYFYPATVLDEIPAQARILKEEVFGPVVAIAGFDTEEEGIAAANDTEFGL
ASYIFTRDLDRALRVADALESGMVGINRGVISDTAAPFGGVKASGFGREGGSEGIEEYLE
TKYVALEP
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgtcatggatgctgtcgaactcatgcgaaccgttcccacaaccctcttcctc
ggcggcgagaagcgtgacgccgagaacggcgccacgttcaccgttttcgaccccgccacc
ggtgacgccctcaccgaggtcgcggacgccagccccgccgacgcgatgaaagcgctcgac
gccgcggtcgcggtgcagcgggagtgggcggcgacgccggcacgtgagcgcggggaactg
ctccgcgcggtgttcgagaagatcacggcccgggccgacgacttcgcgctgctgatgacc
ctggagatgggcaaggcgctgccggagagcgcggcggaggtcaagtacggcgccgagttc
ttccggtggttcagcgaggaggccgtgcgtatcgccggccgctacacaccggcacccgcg
gggaacggacgcatcctggtgaccaagcagcccgtcgggccgtgtctggccatcacaccg
tggaacttcccgctcgcgatgggcacccgcaagatcggtcccgcactggccgccggctgc
acgatgatcgtcaaacctgcctcggagactccgttgacgatgctcctgctcgccgaggtg
atggccgacgcggggctcccgaagggcgtgctgtccgtgctgccgacgtcgaagtcgggg
gaggtgaccggtccgctgctcgacgacccccggctgcggaagctcacgttcaccggctcg
accggggtcggccggatgctcgtcgagaagtcggcgaaggggctgctgcgcacgtccatg
gaactcggtgggaacgcgccgttcgtggtcttcgacgacgccgacgtggacaaggcggtg
gccggcgccgtcctcgccaagatgcgcaacggcggcgaggcctgcaccgcggccaatcgc
ttccacgtcgccaacagtgtgcgggaggagttcaccgcgaagctcgtcgacaagctgtct
tcgtacacgctcggacccggcacggatcccggcacgacgctcggcccgctgatcaatgcg
gatcaactcgagaaggtcggggaactggtgcaggacgccgtcggcgccggtgcccgggtg
cggctcggcggggtcgcaccggaaggtcccggttacttctacccggcgaccgtgctggac
gagatccccgcgcaggctcggatcctgaaggaggaggtgttcggtccggtggtcgcgatc
gccgggttcgacaccgaggaggagggcatcgccgcggccaacgacacggagttcggcctg
gcgtcgtacatcttcacccgggatctggaccgtgcactccgtgtggccgacgccctcgaa
tcgggcatggtcggcatcaaccggggagtcatctcggacaccgctgcccccttcggcggc
gtcaaagcgtcaggcttcgggcgcgaagggggcagtgaaggcatcgaggagtacctggag
accaagtacgtggcactcgagccgtag
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