Rhodococcus jostii: RHA1_ro05868
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Entry
RHA1_ro05868 CDS
T00382
Name
(GenBank) probable exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
rha
Rhodococcus jostii
Pathway
rha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RHA1_ro05868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rha03400
]
RHA1_ro05868
Enzymes [BR:
rha01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
RHA1_ro05868
DNA repair and recombination proteins [BR:
rha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
RHA1_ro05868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Peptidase_S66
Motif
Other DBs
NCBI-ProteinID:
ABG97645
UniProt:
Q0S491
LinkDB
All DBs
Position
complement(6309315..6310571)
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AA seq
418 aa
AA seq
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MTSAQPRATSTGPSTAEQPWPVRTVSAKVAQWIDRLGSVWVEGQITQINARPGTRTAFLV
LRDPSVDMSLSVTCSPQLLQNSPVPLTEGSRVVMFGKLSFYTGRGSVSLRVTEIRAIGIG
ELLARIERLRALLAAEGLFDPRLKRPLPFLPGTIGLITGRASAAEHDVLSVAQRRWPAVR
FEVRNTPVQGATAVPQILDALKELDADPHVDVIILARGGGSVEDLLPFSDETLCRAIVAC
RTPVVSAIGHEPDSPLSDHVADLRAATPTDAAKRVVPDAVAEQALVGELRSRSAAALRNW
VQRESDLISQLRSRPVLADPLRALDHRSDEVERLWEAGRRDISRAIAAESTTIEHLRARL
TTLGPAATLARGYSVVQRIVPDGDPEVLRSVDDAPPGTQIRVRVADGAIRAAVMGKDK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
gtgacctccgcacagccccgcgcaaccagtaccggaccgagtaccgccgagcagccctgg
ccggtccgcaccgtgtcggccaaggtcgcacagtggatcgaccggctcgggagtgtctgg
gtcgaggggcagatcacccagatcaacgcgcgtccgggaacccggaccgcgtttctggtg
ctgcgggatccgtccgtcgacatgtcgctgtcggtgacctgttccccgcagctgttgcag
aactcccccgtcccgctcaccgagggcagccgggtggtgatgttcggcaagttgtcgttc
tacacgggccgagggtcggtctcgctgcgggtgacggagatccgcgcgatcgggatcggt
gaactcctcgcccggatcgagcggttgcgcgcgctgctggccgcggagggtctgttcgac
cctcggctgaagcgtccgctgccgttcctgccgggcaccatcgggctgatcaccggtcgc
gcgagcgccgccgagcacgacgtcctcagtgtggcgcagcgccgctggcccgccgtgcgc
ttcgaggtccgcaacaccccggtgcagggcgcgaccgccgttccgcagatcctcgacgcg
ttgaaggaattggacgccgacccgcacgtcgacgtgatcatcctcgcgcgcggcggcggc
agtgtggaggatctgctgccgttctccgacgagacgctgtgccgcgcgatcgtcgcctgc
cgaactccggtggtcagcgccatcggccacgagccggacagtccgctcagcgatcacgtc
gccgacctgcgggccgcgacaccgacggatgccgccaagcgggtggtgccggacgccgtc
gccgagcaggcactcgtcggcgaattgcggtcacggagcgcggcggcgctgcgcaactgg
gtgcagcgcgagtcggacctgatctcccagctgcggagccggccggtgctcgccgacccg
ctgcgcgcactcgaccaccggtcggacgaggtcgagcgactgtgggaggccgggcgacgc
gatatcagccgggcgatcgccgcggagagcaccacgatcgagcaccttcgtgcacggctg
acgaccctcgggcccgccgcgaccctggcccgcggctactccgtggttcagcggatcgtg
cccgacggcgatcccgaggtactgcgttcggtcgacgacgccccaccgggcacccagatt
cgcgttcgagtcgccgacggcgcaatccgtgccgcggtgatgggaaaggacaagtag
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