Rhodococcus jostii: RHA1_ro05874
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Entry
RHA1_ro05874 CDS
T00382
Symbol
sbcC
Name
(GenBank) ATP-dependent dsDNA exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
rha
Rhodococcus jostii
Brite
KEGG Orthology (KO) [BR:
rha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rha03400
]
RHA1_ro05874 (sbcC)
DNA repair and recombination proteins [BR:
rha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RHA1_ro05874 (sbcC)
Archaeal homologous recombinant proteins
RHA1_ro05874 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
AAA_29
SMC_N
ABC_tran
AAA
AAA_15
Motif
Other DBs
NCBI-ProteinID:
ABG97651
UniProt:
Q0S485
LinkDB
All DBs
Position
6315789..6318770
Genome browser
AA seq
993 aa
AA seq
DB search
MRLHRLEVEAFGPFAGSVEVDFDRLGADGLFLLHGHTGAGKTTILDAVAFALYGTVPGAR
KDGKRLLSDHAPAGSVPTVTLEATIAGRHLRLVRSPEFERPKRRGSGTIKENAKATLTWL
DGRGENLSRIPDIADEVGRLMGMSADQFFQVVLLPQGEFAKFLRADNEERGQLLERLFDT
TRFGTVEEWFLDRRRTSAHDLDEHQRAVDVLLARVATAAGIEGGADADPVTWAHKLEAEA
RETRDLAADDLQTAKSQAKVTRDALTEARRVLELQNRRRRAEAELEAHAAGADRRAVLVA
ELADARRAEPVATVARDADAARAKAAAAARNVEAITDGLRSTVGGADLVSELSWPPTADE
REHIRSRIRAWRDEIVRLDGALAESLAADRLAVEVDRLRTRQVELAEAGDALSREREQLP
LALREAEKALDSAQKARAAVPGLVDARDRAADAASAAADLRTRRAERDRLERGVLDARRQ
HQDAREHWLDLLQRRIAGMAAELAGTLEDGVPCQVCGSSEHPQPAEPSELSVTKTDEDKA
LAAEQKAAAAMTTATEKLGAVERAIGVLVQRGGDGDADELAQALTAAETAVGEATALGDE
VERRSASLTELRDRESHLQERSRDLGVDAATVAERITASTTQLGEIRARVSEAAGDDPSV
EARRARLDALAESASELLDARDAGAGAESAARELAAKAETLAGDAGFDSTADAVAAVRTA
ARQGEIEAVLTAARDAEVGARSVLDDPEVVAVAEADPVELASVQHAHDVAAEVVNVAVAA
ASDAERRLLDLERFVGQLDKAAEAIAPMQAAHEELAALAEVIAGRGQNARKMSLRSYVLA
ARLEEVAVSASARLGRMSAGRYEFVHSDEAGPRGRRGGLGLDIRDDYTGVVRSAKTLSGG
ESFLASLSLALGLADVVAAESGGVVLDTMFIDEGFGTLDADTLDSVMGVLDELRDGGRVV
GIVSHVDEMRQRIPSRLHVIRGRTGSTVEVVAG
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcatcgactcgaggtcgaagccttcgggccgttcgcaggatccgtggaagtc
gacttcgatcggctcggcgccgacgggctctttctgctgcacggtcataccggcgccggt
aagacgacgatcctcgacgcggtggcgttcgcgctgtacggcacggtgcccggggcacgg
aaggacggcaagcgccttctgtccgaccacgcgcccgccggttccgttccgacggtgacg
ctcgaggcgacgatcgcgggccggcatctgcgactcgtccgcagcccggagttcgagcgt
cccaagcgccgtgggtcggggaccatcaaggaaaacgcgaaggccacgctcacctggctc
gacggtcgcggggagaacctgtcacgaatccccgacatcgccgacgaggtcgggcggctg
atgggcatgagcgccgaccagttcttccaggtggtcctgctgccgcagggagagttcgcg
aagttcctgcgcgccgacaacgaagaacgcggtcagcttctggagaggctgttcgacacc
acccgattcgggacggtggaggagtggttcctcgaccgcaggcgaaccagcgcccacgac
ctggacgagcatcaacgggccgtcgacgtcctgctggcgcgggtcgcgactgccgcaggc
atcgaggggggcgccgacgccgatccggtgacctgggctcacaagctcgaggccgaggcg
cgcgagactcgcgacctggccgcggacgacctgcagacggccaagagtcaggcgaaggtg
acccgcgatgcgctgacggaggcgcgccgtgtcctcgaactgcagaaccgcaggcggcga
gccgaggcggaactcgaggcgcacgcagcgggagcggaccggcgggcggtcctcgtcgcc
gaattggcggatgcgcgacgggccgaaccggtcgcgaccgtggcacgcgacgccgacgcc
gcccgggccaaggccgcggccgccgcgcggaacgtcgaggcgatcacggacgggttgcgt
tcgacggtgggcggcgccgatctcgtgtcggagttgtcgtggcctccgaccgccgacgaa
cgggagcacatccggtcgcgtatccgcgcctggcgtgatgagatcgtccgcctcgacggg
gcactcgccgaatccctcgccgccgaccggctcgctgtcgaagtggatcggctgcgtacc
cggcaggtcgaactcgccgaggccggcgacgcgctgtcccgggagcgcgaacaattgccg
ctcgctctgagggaagcggagaaggcgctcgactcggcgcagaaggcccgcgccgcggtg
cccgggctcgtcgatgcccgggaccgggcggccgacgctgcctcggcggcggcggatctc
cgcacccgccgggccgagcgggatcggctcgagcgcggtgtgctcgatgcccggcgacag
catcaggacgcgcgggagcactggctcgaccttctgcaacgtcggatcgcgggcatggca
gccgaattggcgggcacgctcgaggacggtgtcccgtgccaggtgtgcggttcatccgag
cacccgcagcctgccgaaccgtccgagctgtcggtgacgaagaccgacgaggacaaggcc
ctcgccgcggagcagaaggccgcggcggcgatgacgaccgcgaccgagaaactgggcgcg
gtggagcgcgcgatcggcgtgctcgtccagcgcggtggcgacggtgacgcggacgaactc
gcccaggcactcacggccgcggagacggcggtgggggaggcgactgcgctcggcgacgag
gtcgagcgtcggtccgcgtcgctcaccgagctacgggaccgcgagagtcacctgcaggaa
cggtcgcgggacctgggcgtcgacgccgccaccgtcgccgagaggatcacggcgagcacg
acacagctcggggagatccgggcccgggtgagcgaggcggcgggcgacgacccgagcgtg
gaggcgcgccgcgcacgactcgatgcgctcgccgagtccgcatccgagctgctcgacgcg
cgggacgccggtgccggagccgagtcggcggcccgtgaactcgcggccaaggccgaaaca
ctggccggcgacgccggtttcgacagcactgccgacgccgtggccgcggtccggacggcc
gcccgtcagggcgagatcgaggccgtcctcacggcggcgcgagacgccgaggtcggggcg
cgcagcgtgctcgacgaccccgaggtcgttgccgtcgccgaggcggatcccgtggaactg
gcgtccgtccagcacgcgcacgacgtggccgcggaggtcgtgaacgtcgccgtcgcggcg
gcgtccgacgccgagcgccgtctgctcgatctggaacggttcgtcggtcagctcgacaag
gccgccgaggcgattgcgccgatgcaggccgcgcacgaggagctggctgccctcgccgag
gtgatcgcgggccgtggccagaacgccaggaagatgtcgctgcgatcgtatgtgctggcg
gcccggctggaagaggtggccgtctcggcatccgcgcggctcggccggatgtcggcggga
cggtacgagttcgtccacagcgacgaggccggtccgcgaggccgccgcggcggtctgggg
ctggacatccgcgacgactacaccggggtggtgcgttcggccaagaccctgtccggtggt
gagtcgttcctggcgtcgctgtcgctggcgctcggtctcgccgatgtcgtcgcggcggag
tcgggaggcgtcgtcctcgacacgatgttcatcgacgagggattcggcaccctcgacgcg
gacaccctcgactcggtgatgggcgtgctcgacgagcttcgtgacggcggccgggtggtc
gggatcgtcagtcacgtcgacgagatgcgtcagcgaatcccgagccggctgcacgtgatt
cgcggacgcaccggctccaccgtggaggtggtcgccggctga
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