Rhodococcus jostii: RHA1_ro06162
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Entry
RHA1_ro06162 CDS
T00382
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rha
Rhodococcus jostii
Pathway
rha03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rha00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RHA1_ro06162 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rha03021
]
RHA1_ro06162 (rpoA)
03400 DNA repair and recombination proteins [BR:
rha03400
]
RHA1_ro06162 (rpoA)
Enzymes [BR:
rha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RHA1_ro06162 (rpoA)
Transcription machinery [BR:
rha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RHA1_ro06162 (rpoA)
DNA repair and recombination proteins [BR:
rha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RHA1_ro06162 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
ABG97939
UniProt:
Q0S3E7
LinkDB
All DBs
Position
6647336..6648397
Genome browser
AA seq
353 aa
AA seq
DB search
MLISQRPTLTEEVIADNRSKFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKGLVVSSEEDEPVTMYVRKQGPGAVTAGDIVPPAGVTVNN
PDLHIATLNDKGKLEIELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDRLVLDVETKNSITARDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFGLPIEDLDLTVRSYNCLKREGVHTVGELVGRTESDLLDIRNFGQKSIDEVKVK
LHSLGLALKDSPASFDPTTVAGYDAATGTWSDTDAGSFGDAEGTEDYAETEQL
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgctcatttctcagcgacccacgctgaccgaagaggtcatcgctgacaaccgctcgaag
ttcgtcatcgagcccctcgagccaggcttcgggtacaccctcggcaactcgctccgccgc
acgctgctctcgtcgattcccggcgctgctgtcaccagcatccgcatcgacggcgttctg
cacgagttcaccacagttcccggtgtgaaggaagatgtcaccgacatcatcctgaacctc
aagggcctcgtcgtgagctccgaagaggacgagccggtcaccatgtacgtccgcaagcag
ggccccggcgctgtgaccgcaggcgacatcgtgcccccggccggcgtcaccgtgaacaac
ccggatctgcacatcgccaccctgaacgacaagggaaagctggagatcgagctcgtcgtc
gagcgcggtcgcggctacgtccccgccgtccagaacaaggcgtccggcgccgagatcggc
cgtatcccggtcgactcgatctactcgccggtgctcaaggtcacctacaaggtggaggcc
acccgcgtcgagcagcgcaccgacttcgatcggctcgtgctcgatgtggaaaccaagaac
tccatcaccgctcgggacgcgctcgcttcggcaggcaagaccctggttgagctcttcggc
ctggcccgtgagctgaacgtcgaagcagaaggcatcgagatcggaccttcgcctgccgag
gccgatcacattgcttcgttcggactgcccatcgaggacctggacctcacggtccgttcc
tacaactgcctcaagcgcgaaggtgttcacaccgtcggtgagcttgtcggccgtaccgag
tccgatctgctcgacatccgcaacttcggacagaagtccatcgacgaggtcaaggtcaag
ctgcattcgctcggcctggccctcaaggacagccccgcgtccttcgatcccaccaccgtt
gccggctacgacgccgccaccggaacgtggagcgacacggacgccggttccttcggtgat
gccgagggcaccgaggactacgccgagaccgaacagctgtag
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