Rhodococcus jostii: RHA1_ro06190
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Entry
RHA1_ro06190 CDS
T00382
Name
(GenBank) chaperone protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rha
Rhodococcus jostii
Pathway
rha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RHA1_ro06190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rha03019
]
RHA1_ro06190
03110 Chaperones and folding catalysts [BR:
rha03110
]
RHA1_ro06190
03029 Mitochondrial biogenesis [BR:
rha03029
]
RHA1_ro06190
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rha04147
]
RHA1_ro06190
Enzymes [BR:
rha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RHA1_ro06190
Messenger RNA biogenesis [BR:
rha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RHA1_ro06190
Chaperones and folding catalysts [BR:
rha03110
]
Heat shock proteins
HSP60 / Chaperonin
RHA1_ro06190
Mitochondrial biogenesis [BR:
rha03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RHA1_ro06190
Exosome [BR:
rha04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RHA1_ro06190
Exosomal proteins of other body fluids (saliva and urine)
RHA1_ro06190
Exosomal proteins of breast cancer cells
RHA1_ro06190
Exosomal proteins of colorectal cancer cells
RHA1_ro06190
Exosomal proteins of bladder cancer cells
RHA1_ro06190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ABG97967
UniProt:
Q0S3B9
LinkDB
All DBs
Position
6675166..6676779
Genome browser
AA seq
537 aa
AA seq
DB search
MSKQIEFNEVARRSLERGVDKLADAVKVTLGPRGRHVVLAKAFGGPTVTNDGVSIAREIE
LEDPFENLGAQLVKSVATKTNDVAGDGTTTATVLAQAIVRGGLKNIAAGANPMALGIGIN
AAADKVVEALLAAAKPVEGKTSIAQVATVSSRDEEIGEMVGEALTRVGTDGVVTVEESST
LATELVITEGVQFDKGYLSPYFVTDLDAQKAVYEDALVLLYREKITSLPDFLPLLEKVAE
SGKPLLIIAEDVEGEVLSTLVVNSIRKTIKAVAVKAPFFGDRRKAFLDDLAVVTGGTVIN
SDVGLTLKDAGLDLLGSARRVVVSKDETTIVDGAGTDDDIKGRVAQLRREIENTDSDWDR
EKLEERLAKLAGGVAVIKVGAATETDLKERKFRVEDAVNAAKAAVAEGIVPGGGSALVQA
STELADNLGLTGDEATGVKVVREALQAPLYWIASNAGLDGSVVTSKVAEQPKGHGFNAAT
LTYGDLLADGVVDPVKVTRSAVVNAASVARMILTTESAVVEKPAEENEQQTGHGHSH
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcagattgagttcaacgaggtcgcacgccggtctctcgagcgtggagtcgac
aagcttgccgacgcggtcaaggtgaccttgggtccgcgtggccgccacgtagtactggcg
aaggccttcggcggcccgaccgtcaccaacgacggcgtcagcatcgcccgggaaatcgag
ctcgaggacccgttcgagaacctcggcgcgcagctcgtcaagagcgtcgccaccaagacc
aacgacgttgcaggcgacggaaccaccaccgcgaccgtgctggctcaggccatcgtgcgg
ggcggtctgaagaacatcgccgcgggtgcgaacccgatggcgctcggcatcggcatcaac
gccgcggccgacaaggtcgtcgaggcactcctcgccgccgcgaagccggtcgagggcaag
acgtccatcgcccaggtcgcgaccgtgtcctcgcgtgacgaggagatcggcgaaatggtc
ggcgaggcgctcacccgcgtcggcaccgacggcgtcgtgacggtcgaggaatcctcgacc
ctggcgaccgagctcgtcatcaccgagggcgtccagttcgacaagggctacctgtcgccg
tacttcgtcacggacctcgatgcacagaaggccgtgtacgaggacgctctcgtgctgctg
taccgcgagaagatcacgtctctgcccgacttcctgccgctgctggagaaggttgccgag
agcggcaagcccctcctcatcatcgcggaggacgtcgagggtgaggtcctctcgacgctc
gtggtcaactccatccggaagaccatcaaggccgtcgccgtcaaggcgccgttcttcggt
gaccgccggaaggcgttcctcgacgacctcgccgtcgtcaccggtggcacggtcatcaac
tccgacgtcggcctcacgctgaaggacgccgggctggacctgctcggcagcgcacgccgc
gtcgtggtcagcaaggacgagaccacgatcgtcgacggcgccggaacagacgacgacatc
aagggtcgcgtcgcgcagctgcgccgcgaaatcgagaacaccgactccgactgggatcgc
gagaagctcgaagagcgtctggcgaagctggccggtggcgtcgccgtcatcaaggtcggc
gcggccacggagacggacctcaaggagcgcaagttccgcgtcgaggacgccgtcaacgcc
gcgaaggctgctgtcgccgagggcatcgtccccggtggcggttccgccctcgtccaggcg
agcaccgagctggccgacaacctcggtctgaccggtgacgaggccacgggcgtcaaggtc
gtgcgcgaagcactgcaggcgccgctgtactggatcgccagcaatgccggtctcgacggt
tccgtcgtcaccagcaaggttgccgagcagcccaagggccacggtttcaacgccgcgacc
ctgacctacggcgacctgctcgccgacggtgtcgtcgaccccgtgaaggtcacccgctcc
gcggtcgtcaacgcggcttcggtcgcgcggatgatcctcaccacggagagcgccgtagtc
gagaagcctgcggaagagaacgagcagcagaccggtcacgggcacagccactag
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