Rhodococcus jostii: RHA1_ro06381
Help
Entry
RHA1_ro06381 CDS
T00382
Name
(GenBank) helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rha
Rhodococcus jostii
Pathway
rha03420
Nucleotide excision repair
rha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RHA1_ro06381
03430 Mismatch repair
RHA1_ro06381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rha03400
]
RHA1_ro06381
Enzymes [BR:
rha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RHA1_ro06381
DNA repair and recombination proteins [BR:
rha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RHA1_ro06381
MMR (mismatch excision repair)
Other MMR factors
RHA1_ro06381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
ABG98158
UniProt:
Q0S2S8
LinkDB
All DBs
Position
6876790..6878928
Genome browser
AA seq
712 aa
AA seq
DB search
MMDAMSAAGAAEVTSTGLDPEQSAAVLAPRGPVCVLAGAGTGKTRTITRRIAHLVASGHV
AAGQVLAVTFTARAAGEMRGRLRSLGIGDGGAQVQARTFHAAALRQLRYFWPQVIGDTEW
RLLDRKFAVVSSAAGRVGLSTSTESVRDLASEIEWAKASLIAPEDYPRAVAKLRREAPVD
AAKVAEVYHGYEQLKARGQDGMLLDFDDLLLHTAAALEEHSAVAEEFRDRYRCFVVDEYQ
DVTPLQQRVLDAWLGERDDLTVVGDANQTIYSFTGATPNYLLDFSRRFPEATVVRLERDY
RSTPEVVSMANRVIGAARGRIAGTRLQLIGQRDSGPEPSFVEFDDEPAEAAGVARTIKRL
IASGTPAAEIAVLYRINAQSEVHEQALTKLDIPYQVRGGEGFFTRTEVRQAVAALRQAAG
RDDLPDAVGADLVTLVRAVLVPLGLTDAEPAGAQARERWSSLSALVALTEEQLTQDPELT
LDALLRELSLRAEARHPPVVQGVTLASLHAAKGLEWDAVFLVGLTDGTLPIQHVLGDSNS
APDEAAVEEERRLLYVGVTRAREHLQMSWALSRNEGGRKSRRRSRFLHGLIPEDSPASRI
AAPAKSTKKRPRCRLCGKQLIGTTATMLGRCEGCPSNVDVELLESLRSWRLEKSRELKVP
AYVVFSDNTLTALAEQRPQDDRGLVAIPGIGAKKLEQFGEDVLGVIKGSGSP
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgccatgtcagcagccggcgcagcagaggtgacgagtaccggtctcgatccc
gaacagtccgcagcggtactcgctccccggggcccggtgtgtgtgctggcgggggccgga
acagggaagacccggaccatcacccggcgtatcgcgcacctcgtggccagtgggcacgtc
gccgcggggcaggtgctggcggtcacgttcacggctcgcgcggcgggcgagatgcgcggc
cggctgcgcagcctcgggatcggcgacgggggagcgcaggttcaggcgcgcacgttccac
gccgccgcactgcgacagctgaggtacttctggccgcaggtgatcggcgacacggaatgg
cggctgctggaccgcaagttcgcggtcgtgtcgtccgccgccggacgggtcgggttgtcc
accagcacggagagcgtccgcgacctggcgagcgagatcgagtgggccaaggcctcgctg
atcgcgccggaggactacccgcgtgcggtggccaagttacgcagggaggcgccggtcgac
gccgcgaaggtcgccgaggtctatcacggctacgagcagctcaaggcccgcggccaggac
gggatgctcctcgatttcgacgatctcctgctccacacggcggcggcgctcgaggagcat
tcggctgtcgccgaggagttccgcgaccggtaccggtgcttcgtggtggacgagtaccag
gacgtcaccccgctacagcagcgtgtcctcgacgcctggctcggggagcgggacgacctc
accgtcgtcggtgacgccaaccagaccatctactcgttcaccggcgccacacccaactac
ctgctcgacttctcgcgccggttccccgaggccaccgtcgtgcgcctcgagcgcgactac
cgttcgacccccgaggtcgtgtcgatggcgaaccgggtgatcggagcggcgcgcggcagg
atcgcgggcacccgtctgcagctgatcgggcaacgcgactccggaccggagccgagtttc
gtcgagttcgacgacgagccggccgaggccgccggggtggcgcgcacgatcaagcggctc
atcgcgtccggcactccggccgcggagatcgcggtcctgtaccggatcaacgcccagtcc
gaggtgcacgagcaggcgctgacgaaactcgacatcccgtaccaggtccggggcggagag
ggattcttcacgcgtaccgaggtgcgtcaggccgtggcggcactacgtcaggccgcaggt
cgcgacgacctgccggatgcggtcggcgccgacctggtcacgctcgtccgcgcggtcctc
gttccgctggggctgaccgacgcggaaccggcgggtgcgcaggctcgcgaacggtggtcg
tcgctgtcggcgctggtcgcgctcaccgaggagcagctgacccaggacccggagttgacc
ctcgacgcgctgttgcgtgaactgagcctgcgggccgaggcgcggcacccacccgtcgtg
cagggtgtgacgctcgcgtccctgcacgccgccaaggggctcgaatgggacgccgtgttc
ctcgtcgggctgaccgacggaacgctgcccatccagcacgtgctcggcgactccaattcg
gcaccggacgaggccgccgtcgaggaggagcgccggttgctgtacgtcggcgtgacccgc
gcccgggagcacctgcagatgtcgtgggcgctgtcccggaacgagggcggccgcaagtcg
cggcgccgttcgcggttcctgcacggcctcatccccgaggattcacctgcctcgcggatc
gcggcgcccgccaagagcaccaagaagcgtccacggtgccggctgtgcggaaaacagctg
atcgggacgaccgcgaccatgctcggtcgctgtgaagggtgcccgtcgaacgtcgacgtg
gaactgctcgaatcgctgcggtcgtggcggctcgagaagtcgcgggagctgaaggttccg
gcgtacgtggtgttcagcgacaacacgttgacggctctcgccgagcagcgaccgcaggac
gatcgcgggctcgtcgcgatccccgggatcggtgcgaagaagctcgagcagttcggtgag
gacgtcctcggtgtgatcaagggaagcggtagtccctga
DBGET
integrated database retrieval system
