Rhodococcus jostii: RHA1_ro06540
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Entry
RHA1_ro06540 CDS
T00382
Name
(GenBank) possible RNA binding protein
KO
K06959
protein Tex
Organism
rha
Rhodococcus jostii
Brite
KEGG Orthology (KO) [BR:
rha00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
RHA1_ro06540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
S1_RRP5
HHH_7
YqgF
T2SSK
HHH_6
PmbA_TldD_2nd
Motif
Other DBs
NCBI-ProteinID:
ABG98313
UniProt:
Q0S2C3
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All DBs
Position
7041182..7043518
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AA seq
778 aa
AA seq
DB search
MTLKTVNQRIAEELDVREGQVAAAVDLLDGGATVPFIARYRKEVTGTLDDAQLRQLEERL
RYLRELDDRRVAVLESIDSQGKLDDQLRGQIMTADTKARLEDIYLPFKPKRRTKAQIARE
AGHEPVADALITDPSTDPASYTAEQLEGARAILVERFAEDADLVGELRELMWTRGQLVSA
VRKGKETEGAKFADYFEFSEPFGKLPSHRILAVLRGEKEEVLTLTLAPDTEEPVPGEPTV
YEGRIAGRFGIADRGRPADRWLLDTVRWAWRTKMIVTLGIDTRMRLRQSAEKDAVDVFAN
NLRDLLLAAPAGTRATMGLDPGFRTGTKVAVVDATGKVVAHDTIYPHQPQNKWDASLATL
AGLVAKHGVELIAIGNGTASRETDALATELIAKSGTTNLTKIVVSEAGASVYSASAYASA
ELPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSETLLARSLGAVVEDAV
NAVGVDVNTASVPLLSRVSGIAGSLAESIVAHRDQNGPFRSRKGLKDVARLGPKAFEQCA
GFLRIPNGDDPLDASSVHPEAYPVVRKIVGASGTGVREIIGNTSALRSLNPADFVDDRFG
LPTVTDIIGELEKPGRDPRPEFKTATFAAGIEKVSHLKPGMTLEGVVTNVAAFGAFVDIG
VHQDGLVHVSAMSHNFVKDPRDVVKSGDVVKVKVLEVDEARQRIGLTLRLDDEVGAGRKN
DGPRGGGQRQDRRGGGQPQDRRGGKPQQQQGGRDRGRDSRPAPGGSMADALRKAGFGK
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
gtgactctcaagaccgtgaaccagcgcattgccgaggagctcgacgtccgggagggacag
gtcgcggccgccgtggacctcctcgacggtggagccaccgtgcccttcatcgcccggtac
cgcaaggaagtcaccggaacgctcgacgacgctcagctccgccagctcgaggaacgcctg
cggtacctgcgggaactggacgatcgccgggtcgccgtgctcgagtcgatcgactcgcag
ggcaagctcgacgaccagctgcgtgggcagatcatgaccgccgacacgaaggcgcgcctc
gaggacatctacctgccgttcaagccgaagcggcgcaccaaggcgcagatcgcccgcgag
gccggtcacgaacccgtcgccgacgcactgatcaccgatccctccaccgatccggcgtcc
tacacggccgaacagctcgagggtgcgcgcgcgatcctcgtcgagcgtttcgccgaagac
gcagacctggtgggtgagctccgtgagctgatgtggacccgcgggcagctggtgtccgcg
gtccgcaagggcaaggagaccgagggcgcgaagttcgccgactacttcgagttctcggag
ccgttcggcaagcttccttcgcaccggatcctggcggtgctgcgcggcgagaaggaagag
gtactcacgctcacgctggcacccgacacggaggagcccgtccccggcgagcccaccgtc
tacgagggccggatcgcaggccggttcggcatcgccgaccgcggcaggcccgccgaccgg
tggctgctcgacaccgtgcggtgggcgtggcgcaccaagatgatcgtgacgctgggcatc
gacaccaggatgcgcctgcgacagtcggcggagaaggacgccgtcgacgtgttcgccaac
aacctgcgggacctgctgctggcagcgcctgccgggacccgcgccacgatgggcctcgac
cccggcttccggaccgggacgaaggtcgcggtcgtggacgcgaccggcaaggtggtggcc
cacgacacgatctatccgcatcagccccagaacaagtgggacgcctccctggccactctc
gccggtctcgtcgccaagcacggcgtggagctcatcgccatcgggaacggcacggcctcc
cgcgagacggatgcgctcgcgaccgagctgatcgccaagtcgggtaccaccaacctgacg
aagatcgtggtgtccgaggccggcgcgtccgtgtactcggcgtccgcgtacgcctcggcg
gagctgcccgatctcgacgtgtcgatccgcggagcagtctccattgcgcgacgtctgcag
gacccgctcgccgaactggtgaagatcgacccgaagtcgatcggcgtcgggcagtaccag
cacgatgtgtcggagacgctgctcgcgcggtcgctcggtgccgtcgtcgaggacgcggtg
aacgcggtcggcgtcgacgtgaacaccgcgtcggtgccgctgctgtcccgcgtgtcgggt
atcgccggttcgctcgcggagagcatcgtcgcgcaccgggaccagaacggcccgttccgc
agccgcaaggggctcaaggacgtcgcgcgactcggtccgaaggcgttcgagcagtgcgcc
ggcttcctgcgcatccccaacggggacgacccgctcgacgcgtccagcgtccaccccgag
gcctacccggtggtgcgcaagatcgtcggcgcgagcggcaccggcgtgcgcgagatcatc
ggcaacacgtccgcgctccgcagcctgaacccggcagacttcgtcgacgaccggttcggt
ctgcccacggtcaccgacatcatcggtgagctcgagaagcccggccgcgacccccgcccg
gagttcaagacggccacgttcgccgccggcatcgagaaggtgtcgcacctgaagccgggg
atgacgctcgagggcgtcgtcacgaacgtggcggcgttcggcgcgttcgtcgacatcggc
gttcaccaggacggcctcgttcacgtgtccgcgatgtcccacaacttcgtcaaggacccg
cgggacgtcgtgaagtcgggtgacgtcgtgaaggtgaaggtcctcgaggtggacgaggcc
cgtcagcgcatcggactgactttgcggctcgacgacgaggtcggggccggccgcaagaac
gacggtccccgcggcggtgggcagcggcaggaccggcggggcggcggtcagccacaggac
cggcgcggcggcaagccgcagcagcagcagggtggacgcgatcgcgggcgtgactcccgc
ccggcgcccggcggttcgatggccgacgcgctgcggaaggcgggattcggcaagtaa
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