Rhodococcus jostii: RHA1_ro06777
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Entry
RHA1_ro06777 CDS
T00382
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rha
Rhodococcus jostii
Pathway
rha00300
Lysine biosynthesis
rha00470
D-Amino acid metabolism
rha01100
Metabolic pathways
rha01110
Biosynthesis of secondary metabolites
rha01120
Microbial metabolism in diverse environments
rha01230
Biosynthesis of amino acids
Module
rha_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rha00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RHA1_ro06777 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RHA1_ro06777 (dapF)
Enzymes [BR:
rha01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RHA1_ro06777 (dapF)
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Gene cluster
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
ABG98549
UniProt:
Q0S1N7
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Position
7284441..7285310
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AA seq
289 aa
AA seq
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MDFSKGHGTENDFVVLPDPDVRIDLSAPRVAALCDRRRGLGADGILRVAKAGALAGAGVL
AELPDGTSEDDWFMDYRNADGSIAEMCGNGVRVFAHYLRAAGLESRDEFVVGSRAGGKPV
IVHSADGAFGEVTVDMGVVRDLGTSAATIDGKVFNGIGIDVGNPHLACVDAHLTAASLSA
LDLTAAPGFDPGFFPHGVNVEILTRIDSGAVDMRVHERGVGETRSCGTGTVAAATAALRF
DGADSGEVNVRIPGGQVTVAVSGGRATLRGPSVLVASGTLDDGWWNGLA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggatttcagcaagggacacggcaccgagaacgacttcgtggtcctcccggatcccgat
gtccgcatcgacctgtccgctccgcgggtggcggcgctgtgcgatcgcaggcgtgggctc
ggcgccgacggaatcctgcgcgtcgcgaaggccggtgcgctggccggcgccggtgtgctc
gccgaactccccgacggcacgtcggaggacgactggttcatggactaccgcaacgccgac
ggatcgatcgcggagatgtgcggcaacggcgtccgcgtcttcgcccactacctccgggcg
gcagggctcgagtcccgcgacgagttcgtggtcggcagccgggccggtggcaaaccggta
atcgtgcactcggccgacggcgccttcggtgaggtcaccgtcgacatgggtgtggtgcgg
gatctgggaaccagtgccgcgaccatcgacggcaaggtcttcaacgggattggcatcgac
gtcggcaacccgcacctggcgtgtgtcgatgcgcacctcacggcggcgtccctgtcggcc
ctcgacctgacggccgcacccgggttcgaccccggcttcttcccgcacggcgtcaacgtg
gagatcctcacccgcatcgattccggtgccgtggacatgcgggtgcacgagcgcggggtc
ggcgaaacccggtcgtgcggcaccggcacggtggccgcggccaccgccgcgctgcgcttc
gacggtgccgactccggtgaggtgaacgtccgtattcctggtggtcaggtcactgtggcg
gtgtccggcggccgggcgacgttgcgcggaccgtccgtcctggtggcgtccggaaccctc
gacgacggctggtggaacggcctcgcctga
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