Rhodococcus jostii: RHA1_ro06854
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Entry
RHA1_ro06854 CDS
T00382
Name
(GenBank) probable ribonuclease III
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rha
Rhodococcus jostii
Brite
KEGG Orthology (KO) [BR:
rha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rha03016
]
RHA1_ro06854
Enzymes [BR:
rha01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
RHA1_ro06854
Transfer RNA biogenesis [BR:
rha03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RHA1_ro06854
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
ABG98626
UniProt:
Q0S1G0
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All DBs
Position
complement(7370117..7371406)
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AA seq
429 aa
AA seq
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MSEVTDDASSPGPAEEPGRQIVPLLAPRDGVPDVVTTAEGVAKAAAALSEGTGPLAVDAE
RASGFRYSARAYLVQLRREGAGTVLLDPIPTAADLAPLAEVINPLEWILHSADQDLPGLA
EIGLAPATLFDTELAGRLAGFERVGLAAIVERTLGLELRKGHGAADWSKRPLPDSWLNYA
ALDVEVLVELRNVMAAELDEQGKSEWAAQEFEHIRLAGPPKPKADRWRRTSHITSLKTQR
QLAAARSLWQAREDLARKRDVSPSRVLPDAAIIDAATKDPRSIEALRALPVFGGPRQRRH
SRIWLQALEDARALPDTELPPKTPPFTGPPPASRWARHDPDAAERLTAARAALAALGTEV
SVPVENLVTPELVRRLCWDWSAPEGGDVESAIDRVLDAGGARPWQRMLTVPVLASALLSA
AEQKGSGDD
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagtcaccgacgacgcctcgtcacccggccctgccgaagagcccggccggcag
atcgttcccctgctcgcaccccgggacggcgtgcccgacgtcgtgaccacggcggagggt
gtcgcgaaggccgcggccgcgctgagcgagggcaccggcccgctggcggtcgacgccgag
cgggcgtccggcttccgctattcggcgcgggcgtatctcgtgcagttgcgccgggaaggt
gcggggacggtgctcctcgacccgatccccaccgccgccgatctcgccccgctggcggag
gtgatcaacccgctggagtggatcctgcactccgcggaccaggatctgccggggctcgcg
gagatcggcctggcgccggcgacactgttcgacaccgaactggcggggcgcctcgccggg
ttcgaacgggtcggtctcgccgcgatcgtcgagcggacgctgggcctcgaactgcggaag
ggccacggcgccgccgactggtcgaagcggccgctgcccgattcctggctaaactacgcg
gccctcgacgtcgaggttctcgtcgagttgcggaacgtgatggccgcggaactcgacgag
cagggcaagagcgagtgggctgcacaggaattcgagcacatccggctcgcggggcccccg
aagcccaaggccgaccgctggcggcggacgtcgcacatcacgtcgctgaagacgcagcgg
caactcgccgccgcccgttcgctgtggcaggcccgcgaggacctcgcccgcaaacgcgac
gtctcccccagccgggtcctgccggatgcggcgatcatcgacgccgcgacgaaggacccg
cggagcatcgaggcactgcgggcgctgcccgtgttcggcggtccccgtcagcggcggcac
tcccggatctggctacaggcgctcgaggatgcccgggcactgccggacacggaactgcct
ccgaagaccccgccgttcacgggaccgccgccggcgagtcggtgggcgcggcacgacccc
gacgccgccgagcggctgacggcggcccgcgccgcgctggccgctctcggtacggaggtg
tcggtgccggtggagaacctggtgaccccggaactcgtccgcaggttgtgctgggactgg
tcggcccccgagggcggcgacgtcgagtcggcgatcgaccgggtgctcgacgcgggcggt
gcccgcccatggcagcggatgctgacggtgcccgtactggcgagcgcgctgctctccgcc
gccgagcagaagggttccggcgacgactga
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