Rodentibacter haemolyticus: IHV77_01265
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Entry
IHV77_01265 CDS
T07810
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
rhae
Rodentibacter haemolyticus
Pathway
rhae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IHV77_01265 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhae03400
]
IHV77_01265 (recC)
Enzymes [BR:
rhae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
IHV77_01265 (recC)
DNA repair and recombination proteins [BR:
rhae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IHV77_01265 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QPB42788
LinkDB
All DBs
Position
complement(252388..255786)
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AA seq
1132 aa
AA seq
DB search
MFIVYYSNQLEKQKEILAEVFKTLPPEDPFQQDIILVQSPGMAQWLQMALAKKNGISANL
TFPMPATFIWQLYADNLPAVSLQNPFDKEAMMWRLMDLIPDFLMRESFAPLRHYLASSHH
SEQYKRYQLSSKIADLFDQYLVYRPEWIFAWERGEDENITAQIEMQQSHLNETLLQQIQD
NVAWQGTLWRALVANIKADMGDQAMHRAALHEQFLALLNDKNRAKKLPERIFIFGISALP
KAYLSILQAISSEVDIHLFFNNPSQEYWGDIRDLRMDYLRSRMRRDYQKQNEIQPLFSEG
QISQLEQGDLETTYHDENLQIGNPLLAAWGKMGRDFLYTLVRDEERIETYSVNAYEDISN
STLLGQLQSHILHLENRSLKIEKNDRTLTVHSCHSAMREVEVLQDYLLDLFNQDPTLTPK
DIVVMVADINQYTPYIQAVFGQKNGNAPLIPFSISDNKLSESDVLVSCYLTLLRLKESTF
SAEEILTLLDVPAIRERFDISLSDLPLAREWVADAGIRFGLQKLQNGVNFNSWQAGLERM
LLGYAMREEHGIWQESLGLDSSYGLKGLLAGKLSHFFSALSAWYEKLQHTHSMEKWREIL
TALLADFFVQNEETKDTLFYIQEKINEIAEHLTELHFDTPLQADVIADVMTIKLEETPNS
LKFLAGKVNFCTLLPMRSVPFKAVCLLGMNEADYPRAQTPNSFDLMQYHHQKGDRVRRDD
DRYLFLEALLAARDYCYISYIGRSITDNQPKAPSVLVTQLLDYINHGQRDEQKIPVHQHS
MTAFSPNNFKNTENFDRSFAAKWLPMAKIDAGAQQKEFIVKMNNRENMTEIELDRFVRFV
ENPVKFFFEKQLGVYFRDEDDRIADSENFVLSGLDKYALNNALVYTDEYKFDEYFAQAAV
KGVLPRAQFGKVAAETVRDTVLEFKEKIEDLGKPHNASIDFNLDVLWGDKTQQVRLFGYI
ENIFDDERVIEWRFADYKERYRIRPWLYYLIQCVTQNNAMPPILITKDKRIEFSQIAPET
ALAQLQIYVQAYLQSQSEIQLIPTVDKITDFIVKEESAVDFETILEKLKKLAEDHKFGNP
RKKADPYWSRVLAQTTKFEKEENLTALIEQTKNWFGLMFAEPEKKTVKKGGK
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
gtgtttatcgtttattattccaatcagcttgaaaaacaaaaagagattcttgccgaagtc
tttaaaacgcttcctcctgaagatccttttcaacaagatattattttggtgcaaagtccc
ggaatggcacagtggctacaaatggctttggcaaagaagaacgggatttccgctaatttg
actttcccgatgccggcaacctttatttggcaactttatgcggataacttaccggcggtt
tctttgcaaaatccttttgataaagaggcaatgatgtggcgtttaatggacttaattcct
gattttttaatgcgggaaagttttgcgcctttgcgtcattatttggcttcttcgcaccat
tccgaacaatataaacgctatcaattaagtagtaaaatcgccgatttattcgaccaatat
ttagtttatcgccctgaatggatttttgcttgggaaaggggggaagacgaaaatattaca
gcgcaaattgaaatgcaacaatctcatttaaatgaaacattgttgcaacaaattcaagat
aatgtggcgtggcaagggacattatggcgtgcattagtggcgaatataaaagcggatatg
ggcgatcaagctatgcaccgtgccgccttacacgagcaatttttagccttattaaatgat
aaaaatcgagctaaaaaattacccgaacgcatatttattttcggtatttctgcactacca
aaggcatatttatccattctgcaagcgatatcatcggaagtggatatccatttgtttttc
aataatccaagccaagaatattggggtgatattcgtgatttacgtatggattatttacgc
tcccgtatgcgccgtgattatcaaaaacaaaatgaaatccaaccgctcttttcggaaggg
caaatatcacaattagaacaaggcgaccttgagacgacttatcacgatgagaatctccaa
atcggtaatccgttgcttgccgcttggggaaaaatgggacgtgattttctttacacttta
gtacgagacgaagagcgaatcgaaacttactctgtgaacgcttatgaggatatttcaaat
tcgaccctactcggtcagctgcaatcacatattttacatttagaaaaccggtctttaaaa
attgaaaaaaatgaccgcactttaacggttcattcctgccatagtgcgatgcgggaagtg
gaagtattgcaggattacttactggacttattcaaccaagatccgacattaaccccgaaa
gatatcgtcgttatggtggcggatattaatcaatacaccccttatattcaggcggttttc
gggcaaaaaaatggtaatgcacctttgattccgttttccatttccgataacaaattatcg
gaaagtgatgtgctggtttcctgctatttaaccttattgcgcttgaaagaaagcacgttt
agtgcggaagagattttgactttattagatgttccggcaatacgtgagcgttttgatatt
tcactttccgatttgcctttagcgcgcgagtgggtggcggatgccggcattcgtttcggt
ttgcaaaaactgcaaaatggcgtgaattttaattcttggcaagcgggtttggaacgtatg
ctgctcgggtatgcgatgcgggaagaacacggtatctggcaagaaagtctcggattggac
agtagttacggcttaaaaggtttgcttgccggtaaattatcacattttttctctgcgctt
tcggcttggtatgaaaaacttcaacatacgcattctatggaaaaatggcgtgaaatactg
accgcacttttagcagatttttttgtgcaaaatgaagaaacaaaagatacattgttttat
attcaagaaaagatcaatgaaatagcggagcacttaaccgagcttcattttgatacaccg
ttacaagctgatgtgattgccgatgtgatgacgattaaattagaagaaacgccgaacagc
ctgaaatttttagccgggaaagtgaatttttgcacattattaccaatgcgttcggtaccc
tttaaagcggtgtgtttgttggggatgaacgaggcggattatccgcgcgcacaaacaccg
aacagttttgatttaatgcaatatcatcatcaaaagggcgatcgtgtacgccgtgatgac
gaccgttatttattcctcgaagccttacttgcggcgagagattattgttacatcagctat
atcgggcgttcaattactgataatcaaccgaaagcgccttccgtattggtaacgcagttg
ctggattatattaatcacggtcaaagggacgagcaaaaaatacctgttcaccaacacagt
atgacggcatttagcccaaacaattttaaaaacaccgaaaattttgaccgctcttttgcc
gccaaatggttgccgatggcgaaaatagacgccggtgcgcagcagaaagaatttatcgtg
aagatgaataatagagaaaacatgacggaaatcgagttggatcgttttgtgcgttttgtg
gaaaatccggtgaaatttttctttgaaaaacaattaggcgtatattttcgtgatgaagat
gatcgtattgccgacagcgaaaattttgttttaagcggattggataaatacgcactgaat
aacgcgcttgtttatacggatgagtataaatttgatgaatattttgcgcaagctgcggta
aaaggcgtgttgccacgggctcaatttggcaaggttgcagcagaaactgtgcgggatacc
gtgctggaatttaaagagaaaattgaagatcttggcaaaccgcataatgcttccattgat
tttaatttggatgttttgtggggcgataaaactcaacaggttcgtttgttcggctacata
gaaaatatatttgatgatgaacgggtgattgaatggcgttttgccgattacaaagaacgc
tatcgtattcgcccttggctttattatttgattcaatgtgttacgcaaaataatgcgatg
ccgccgattttaatcacgaaagataagaggattgagttttcacagatagcgcctgaaacc
gccttggctcagctacaaatttatgtgcaggcttatttgcaaagccagtctgaaattcaa
cttattccaaccgtggataaaatcaccgatttcattgtaaaagaggaaagtgcggtcgat
tttgaaacgattttagaaaaactcaaaaaattagcggaagatcataaattcggcaaccct
aggaaaaaagccgatccctactggtctcgtgtgttggcacaaaccacaaaatttgagaag
gaagaaaatttaaccgcactaatcgagcaaacgaaaaattggttcggattaatgtttgcc
gaaccggaaaagaaaacggttaagaaaggcggaaagtaa
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