Rodentibacter haemolyticus: IHV77_02085
Help
Entry
IHV77_02085 CDS
T07810
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhae
Rodentibacter haemolyticus
Pathway
rhae03420
Nucleotide excision repair
rhae03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IHV77_02085 (uvrD)
03430 Mismatch repair
IHV77_02085 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhae03400
]
IHV77_02085 (uvrD)
Enzymes [BR:
rhae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IHV77_02085 (uvrD)
DNA repair and recombination proteins [BR:
rhae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IHV77_02085 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
IHV77_02085 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PhoH
Motif
Other DBs
NCBI-ProteinID:
QPB42937
UniProt:
A0ABX6UYM5
LinkDB
All DBs
Position
complement(415030..417210)
Genome browser
AA seq
726 aa
AA seq
DB search
MDISELLDGLNDKQREAVAAPLGNYLVLAGAGSGKTRVLTHRIAWLIAVENISEGSIMAV
TFTNKAAAEMRHRIQDTLAKHSQSNLFGMWIGTFHSIAHRLLRAHHLDVGLPQDFQILDS
EDQVRLVKRLLKLHNFDEKAFPPKQACWYINNKKDEGLRPHEIEDFNDRQEREWIKIYQI
YQDTCDRAGLVDFAELLIRAYELFDKKPLILQRYQQRFQHILVDEFQDTNKIQYKWIKIL
AGETGKIMIVGDDDQSIYGWRGAQVENIQKFLKDFKAETIRLEQNYRSTANILNSANELI
SNNADRLGKNLWTNGEKGDPVGIYAAFNELDEAKFVASQIQDWTENGGRLDDCAVLYRSN
SQSRVIEEALIRCQIPYRIYGGMRFFERQEIKDALAYLRLINNRQDDAAFERVINTPPRG
IGTRTLDILRNLTRERQITLWQAIQIATQENMLTGRASTALLRFQELINSLQIDTEEMPL
FAQTDFVIKHSGLYDMYKQEKGEKGEVRIENLEELVTATREFIKPDDAEEMTDLTAFLTH
ASLEAGEEQASPHQACVEMMTLHSAKGLEFPRVFMIGVEEGLFPSFRSFEEPGRLEEERR
LAYVGITRAKQKLTISYAESRRLYAKEERHLPSRFIAELPKDCIQEIRLRGTVTRAMNLA
KVGTLSHSTGNENGWKMGQKVRHEKFGLGTVINIEGSDNNTRLQIAFQAQGIKWLIAHLA
KLEKVR
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggatatttccgaattacttgacggcttaaacgataaacagcgagaggcggtagcagcg
cctcttggcaattatttggttttggcgggggcggggagtggtaaaacccgtgtgctgact
caccgaattgcgtggctgattgccgtagaaaatatttctgaaggcagtattatggcggtc
acgtttaccaataaagccgccgcagaaatgcgccatcgtattcaagatacgttagccaaa
cattcgcaatccaatttatttggtatgtggattggcacgttccatagtattgcacatcgt
ctgttacgcgctcaccacttggatgtaggattgccgcaagatttccaaattttggattcg
gaagatcaggttcgtttagtaaaacgtttgcttaaattacataattttgatgaaaaagcc
tttccgccgaagcaagcctgttggtatatcaacaacaagaaagacgaaggtttacgccct
cacgaaattgaagatttcaatgatcggcaagaacgtgagtggattaaaatttatcaaatt
tatcaagatacctgtgatcgagcgggtttggtggattttgccgagcttttgattcgagct
tatgaattatttgataaaaaaccgttgattttgcaacgttaccaacaacgctttcaacat
attttggtggatgaatttcaagacaccaataaaattcagtataaatggattaaaatcctc
gcaggggaaaccggcaaaataatgattgtaggcgatgacgatcaatctatttacggttgg
cgtggggcgcaagttgagaatatccagaaatttctaaaagattttaaagccgagaccatt
cgccttgaacaaaattaccgctcgacggcaaatattctgaacagtgcaaatgaattaatt
tctaacaatgcagatcgtcttggcaaaaatttgtggacgaatggagaaaagggcgatcct
gtggggatttatgctgcctttaatgaattggatgaggcaaaatttgtcgcttcacaaatt
caagattggacagaaaatggcggcaggttagatgattgcgccgtgttatatcgtagcaac
agccaatcgcgtgtcattgaggaagccctgattcgttgccaaattccctatcgtatttac
ggcggaatgcgattttttgaacggcaagaaattaaggatgctctggcttacttacgtttg
atcaataaccgtcaagatgatgcggcctttgaacgggtgattaatacaccgccacgaggt
atcggcacccgcacattggacatattaagaaatttaacccgtgaacggcaaataacccta
tggcaggcgatacaaatcgctacacaagaaaatatgctgacagggcgtgcttccactgca
ttattacgtttccaagaacttattaattctttacagatcgataccgaagaaatgccgtta
tttgcgcaaactgattttgtgattaaacattccggcttgtatgatatgtataagcaggaa
aaaggcgaaaagggcgaagtacggattgaaaatttggaagaattggtaacggcaacccgt
gagtttataaaaccggatgacgcagaagaaatgacagatctgacggcatttctaacacat
gcttctcttgaagccggtgaagaacaggcttctcctcatcaagcctgtgtggaaatgatg
accctgcattcagcaaaaggcttagagtttcctcgtgtatttatgattggcgtggaagaa
ggtttgtttccaagttttcgttcctttgaagaaccgggacgtttggaagaagaacgtcgt
ttagcttatgttggcattacacgggcaaaacaaaaactcacgatttcttatgcggaaagc
cgccgattatatgctaaagaagagcgccatttgccttcacgttttattgcggaattaccg
aaagattgcattcaagaaattcgtttacgaggaaccgttacccgtgcgatgaatttagcc
aaagtgggtacgctatcgcattcaacagggaatgaaaacggttggaaaatggggcaaaaa
gtaagacatgaaaagttcggtttagggactgttatcaatattgaaggtagcgacaataac
acgcgtttacaaattgctttccaagcacaaggtattaagtggttaatcgcacatttggca
aaattggaaaaagtgcggtag
DBGET
integrated database retrieval system
