Rodentibacter haemolyticus: IHV77_04155
Help
Entry
IHV77_04155 CDS
T07810
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rhae
Rodentibacter haemolyticus
Pathway
rhae03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IHV77_04155 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhae03400
]
IHV77_04155 (mutM)
Enzymes [BR:
rhae01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
IHV77_04155 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
IHV77_04155 (mutM)
DNA repair and recombination proteins [BR:
rhae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IHV77_04155 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_IS1595
Zn_ribbon_8
DZR
Zn_ribbon_6
Zn_ribbon_TiaS
Zn_ribbon_SprT
DUF7573
Zn_Ribbon_1
Motif
Other DBs
NCBI-ProteinID:
QPB43296
LinkDB
All DBs
Position
869434..870249
Genome browser
AA seq
271 aa
AA seq
DB search
MPELPEVETALRGVSPYLKGFTIEKITVRQPKLRWVVSPELVELKNVKILTLSRRAKYLI
IHTEKGYIIGHLGMSGSVRIVPHDSPIDKHDHLDIVINNGKLLRYNDPRRFGAWLWTEDL
DEFHLFLKLGPEPLSDEFNAEYLFKKSRKKTTALKTFLMDNAVVVGVGNIYANESLFLCG
LHPLKSAGNLTRKQCGLIVDTIKTVLAKAIEQGGTTLKDFLQPDGRPGYFAQELLVYGNK
DKPCPKCGTKIESLVIGQRNSYLCPHCQKKK
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacttcctgaagtcgagaccgccctgcgcggtgtaagcccttatctaaagggg
tttaccattgaaaaaattaccgtacgccaacctaaattacgttgggtggtttcacctgaa
ttggtagaactaaaaaatgtaaaaattttaaccctcagccgccgagcgaaatacctcata
attcacacggaaaaaggctatattatcggtcatttaggaatgtccggttctgtacggatc
gtgccgcatgatagcccgattgataagcacgatcatcttgatatcgtcataaataatgga
aaactattacgttataacgatccccgccgtttcggtgcttggctatggacggaagatctt
gatgaatttcacttattcttaaaactcggccctgaacctctttctgacgaatttaatgca
gagtatctgtttaaaaaatctcgcaaaaaaacaaccgcacttaaaaccttcctgatggat
aatgccgttgttgtcggtgttgggaatatttacgccaatgaaagcctatttttatgtggt
ttgcacccactcaaatcggcgggtaatcttacccgaaaacaatgcgggttaatcgttgat
acaattaaaacggtactggctaaagcgattgagcaaggtggaacaactcttaaagacttt
ttacagcctgatggccgtcccggttattttgcacaagaactgttagtgtatggtaacaaa
gataaaccttgtccaaagtgcggtacaaaaatcgaaagtttagtgattggtcaacgtaac
agttatctttgcccccattgccaaaagaaaaaataa
DBGET
integrated database retrieval system
