Rodentibacter haemolyticus: IHV77_08795
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Entry
IHV77_08795 CDS
T07810
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
rhae
Rodentibacter haemolyticus
Brite
KEGG Orthology (KO) [BR:
rhae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhae03021
]
IHV77_08795 (rapA)
Transcription machinery [BR:
rhae03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
IHV77_08795 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
Tudor_RapA
ResIII
DEAD
AlgP_helical
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QPB43713
UniProt:
A0ABX6V270
LinkDB
All DBs
Position
complement(1861710..1864493)
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AA seq
927 aa
AA seq
DB search
MPFALGQRWLSESENNLGLGVVTAFDARTVSLHFPAADESRIYSIAQAPLTRIQFNKGET
LTHKAGWQGKIIDIQSLRNLNCYLVENPQGEQVVVQESDISPLVSFSSAKDRLFSAQLDR
SHHFALRYRTLRHQQAQFQSPLRGLRGIRAGLIPHQLHIAAEVGKRVNPRVLLADEVGLG
KTIEAGMILQNQLFAEKVQRALILVPENLQHQWLVEMLRRFNLHFSLFDEERCADFVTTG
ENPFASESLIICALDWLVNSPKRAEQALAAGFDCLIVDEAHHLVWHEDAPSHTYLLVEQL
AQAIPSVLLLTATPEQLGQESHFARLRLLDPERFFDYAVFQKEQKNYQPVANAVQSLLAD
KSLSAVEKNHISDLLNEQDVEPLFRAIDSHNDEEQQSARQELIQSLIDRHGTGRILFRNT
RQGVKGFPHRIYHQITLTAESESQVQDDKMQWLLNFLKMQRDEKIFVICQSAQTAIRLEQ
LLREKEAIRAAVFHEKMSIIERDRAAAYFADMAQGAQVLLSSGIGSEGRNFQFANTLVLF
DLPHNPDLLEQCIGRLDRIGQARDVQIYVPCMENSADYALARWYHEGLNAFEQTCPMGMT
LFEHFSEPLQKVRSNSTALSDMDKLITETKKAREKLKRELEQGRDRLLELNSNGGEQAQQ
LAQEIAAQDNEVELVNFTLDLFDIIGVEQDDLGENSLVITPTGTMLVPDFPGLKEEGVTV
TFDRNLALAREELEFLTWDHPMIRQGIDLIASGDIGKAAMALLINKQLPAGTLLLEAVYV
IETQSPKGLQLNRFLPPTPIRLLLDSKGNNIAEQVAFETLQNKLKPLGKDVANKMIKMAR
PTLEQLLVMGEEKVQSLAQTAISEAKRSADYALTAELNRLQALQAVNKNIRQSEIDILEA
QRLQSLQELAKATWRLDSLRVIITNKE
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgccttttgcccttggtcagcgttggttaagtgaaagtgaaaataatcttggattaggt
gtagttaccgcttttgatgcccgcacggtgagtctccacttccctgcggcggatgaaagc
cgtatttattcgatagcgcaagcgccacttacccgcattcaatttaacaaaggcgaaacg
ctaacacataaagctggttggcaagggaaaatcattgatattcagtccctaagaaatcta
aattgttacttggtagaaaatccgcaaggcgagcaggtagttgtgcaagaaagcgatatt
tcccctctcgtctctttcagctcggcaaaagatcgtcttttttccgcacaattggatcgc
agccatcattttgcattacgttatcgcacgctgagacatcaacaagcacaatttcaatca
ccactccgtgggttacgcggtattcgcgcgggtttaattcctcatcaattgcatattgcc
gccgaagtaggtaagcgtgtgaatccccgcgtgctacttgccgatgaagtgggattagga
aaaaccattgaagccggaatgattctacaaaatcaattgttcgccgaaaaagtgcaacgc
gcccttattctcgtaccggaaaacttgcaacatcaatggttagttgaaatgctacgccgc
tttaacttacatttttcattatttgatgaagagcgttgtgccgatttcgttaccacggga
gaaaacccctttgcttcggaatccttgataatttgtgcgttagattggttggtcaattcc
ccaaaacgtgccgaacaagccctcgccgccggttttgattgtttaattgtcgatgaagcc
catcatcttgtttggcacgaagatgcaccgagtcacacttatttattggtagaacaactc
gcacaggctattccttccgtattattactcaccgcgactcctgaacaattggggcaagaa
agccacttcgcccgcttgcgattgctcgatcccgaacgtttcttcgattatgccgtattc
caaaaagagcaaaaaaattatcaacctgtcgcaaatgcggtgcaatcattgctggcggat
aaatcgctaagtgcggttgaaaaaaaccatatttccgatttgttaaatgaacaagatgta
gagccgctgttccgcgccattgattcccataatgacgaagagcagcaatctgcccgtcag
gaactcattcaaagccttatcgatcgtcacggtaccggtcgcatactgttccgcaatacc
cgtcaaggggtaaaaggttttccacatcgtatttatcatcaaattacgctcaccgcggaa
agcgaaagccaagttcaagatgataaaatgcaatggcttttgaatttccttaaaatgcaa
cgcgatgaaaaaattttcgtcatttgccaaagcgcacaaacggcaatccgcttagaacaa
cttctgcgtgaaaaagaagcgattcgtgcggcagtattccatgaaaaaatgtctattatc
gaacgtgatcgtgccgccgcctactttgccgatatggcgcaaggggcgcaggtgttattg
agttccggtatcggttcggaggggcgtaattttcaattcgccaatacgttggtactattt
gatttaccgcacaaccctgatttattagaacaatgtatcgggcgtttggatcgtatcggt
caagcccgtgacgtacaaatttacgttccttgtatggaaaactctgccgattatgcgctg
gcgcggtggtatcacgaaggcttgaatgcctttgaacaaacctgtccaatgggtatgacg
ctgtttgaacatttttccgaaccgctacaaaaagtgcggtcaaattcaaccgcactttcg
gatatggataaactcattaccgaaacgaaaaaagcacgggaaaaattaaaacgagaactg
gaacaaggacgtgatcggttgttggaactcaattccaacggtggcgaacaggcgcaacaa
ttagcgcaagaaattgcggcacaagataacgaagtcgaattagtgaattttacgctggat
ttattcgacattatcggtgtagaacaagatgatctcggtgaaaatagcctcgttatcaca
cctaccggcacaatgcttgtaccggattttccggggctgaaggaagagggggttacggta
acctttgatcgcaatctcgcccttgcacgtgaggaattagaatttttaacttgggatcac
ccgatgatccgtcaaggcattgatcttattgcttcaggcgatatcggcaaagcggcaatg
gcattactcatcaacaagcaattaccggctggtactttgttattagaagcggtttatgta
atagaaacccaatcaccgaaaggattacagctaaatcgtttcttaccgccaaccccgatt
cgcctattacttgatagcaaaggcaacaatattgccgaacaggtcgcttttgaaacctta
caaaataaactcaaaccgctcggcaaagatgtggcaaataaaatgatcaaaatggcccgt
ccaaccttggaacaattactggtgatgggagaagagaaagtgcaatctctcgcacaaacc
gcaatttccgaagcaaaacgttctgccgattacgcattgactgccgagctcaaccggcta
caagccttacaagccgttaataaaaacattcgtcaaagcgaaattgatattttggaagcg
caacgcctgcaatccttgcaggaacttgccaaagccacatggcgattggatagcctacgc
gtcattatcaccaataaggaataa
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