Rodentibacter haemolyticus: IHV77_09125
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Entry
IHV77_09125 CDS
T07810
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
rhae
Rodentibacter haemolyticus
Pathway
rhae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IHV77_09125 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhae03021
]
IHV77_09125 (rho)
03019 Messenger RNA biogenesis [BR:
rhae03019
]
IHV77_09125 (rho)
Transcription machinery [BR:
rhae03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
IHV77_09125 (rho)
Messenger RNA biogenesis [BR:
rhae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
IHV77_09125 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
AAA_22
AAA_25
AAA
Motif
Other DBs
NCBI-ProteinID:
QPB42075
UniProt:
A0ABX6UXS0
LinkDB
All DBs
Position
complement(1930888..1932150)
Genome browser
AA seq
420 aa
AA seq
DB search
MHLTELKNTPVSDLVKLGEEQMGLENLARLRKQDIVFAILKQHAKSGEDIFGGGVLEILP
DGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLQTGDKIEGKIRPPKEGERYFALLKVDQV
NDDKPEVSRSKILFENLTPLHANSRLRMERGNGSTEDLTARILDLASPIGKGQRGLIVAP
PKAGKTMLLQNIAQSITHNYPECELIVLLIDERPEEVTEMQRSVKGEVIASTFDEPAARH
VQVAEMVIEKAKRSVEHKKDVVILLDSITRLARAYNTVTPASGKILSGGVDANALHRPKR
FFGAARNVEEGGSLTIIATALVDTGSKMDEVIFEEFKGTGNMELHLSRKIAEKRVFPAID
FNRSGTRKEDLLTSPDELQKMWILRKILNPMGEVEAMEWLIDKLGVAKTNEEFFEIMKRS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatttaacagaactaaaaaatacgcccgtttcagatttagtgaaacttggtgaagag
caaatgggtttggaaaatttagcacgtttgcgcaaacaagacattgtctttgcaatttta
aagcaacacgccaaaagtggtgaagatattttcggcggcggcgtgctggaaattttaccc
gatggtttcggttttctccgctccgccgatagttcctacctcgccggccctgacgacatt
tatgtatctcccagccaaatccgccgttttaatcttcaaaccggtgataaaatcgaaggt
aaaattcgcccgcctaaagaaggtgaacgctatttcgcattattgaaagtcgatcaggtc
aatgacgataagccggaagtttctcggagtaagatcttatttgaaaatttaacgccatta
cacgcaaactcccgtttaagaatggagcgtggtaacggttcaacggaagatttaaccgca
cgtattttggacttggcatctccgattggtaaaggtcaacgcggtttgattgtagcgcca
ccaaaagccggtaaaacaatgctgttacaaaacatcgcacaaagcattacgcataactat
ccggaatgtgagctgatcgtcttgcttatcgatgaacgtccggaagaagtaacggaaatg
cagcgttcggtaaaaggtgaagtgatcgcttcaacctttgatgaaccggccgcccgtcac
gtacaagttgcggaaatggtgatcgaaaaggcaaaacgttctgtggaacacaaaaaagat
gtggtgattttacttgattccatcacccgtttagcacgtgcttacaacacggttacaccg
gcttcaggtaagattttgtccggtggtgtggatgcaaatgctttacaccgtccaaaacgt
ttcttcggtgccgcacgtaatgtagaagaaggtggaagtttaaccattattgcaacggcg
cttgtcgataccggttcaaaaatggatgaagtgattttcgaagaatttaaaggaaccggt
aatatggaacttcatctttcccgcaaaatcgctgaaaaacgtgtattcccagcgattgat
ttcaaccgctccggaacacgtaaggaagacttgctcacttcacctgatgaattacaaaaa
atgtggattcttcgtaaaatccttaacccgatgggcgaagtggaagcaatggaatggctt
attgataagctcggtgtggccaaaaccaacgaagaattttttgaaattatgaaaagatcg
taa
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