Rodentibacter haemolyticus: IHV77_09355
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Entry
IHV77_09355 CDS
T07810
Name
(GenBank) YcaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
rhae
Rodentibacter haemolyticus
Brite
KEGG Orthology (KO) [BR:
rhae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhae03009
]
IHV77_09355
Ribosome biogenesis [BR:
rhae03009
]
Prokaryotic type
ribosomal protein modification factors
IHV77_09355
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Semialdhyde_dhC_1
Motif
Other DBs
NCBI-ProteinID:
QPB42118
LinkDB
All DBs
Position
complement(1978518..1980281)
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AA seq
587 aa
AA seq
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MSEQTFIPGKDAALEDSISTFQQKLTALGFNIEEASWLNPVPNVWSVHIRDKNCPQCFSN
GKGASKKAALASALGEYFERLSTNYFFADFYLGQSIANGDFVHYPNEKWFPIKDDSMLPE
GILDDYLLNYFDPNSELTPELLVDLQSGNDARGIVALPYVRQSDSQTVYIPQSIIANLYV
SNGMSAGNTKFEARVQGLSEVFERYVKNKIIAEAISLPEIPTDVMARFPSIQASITKLEE
EGFPIYAFDASLGGKYPVICVVLLNPNNGTCFASFGAHPNFQVALERTVTELLQGRSLKD
LDVFSPPSFNNDDVADHANLETHFIDSSGLISWDLFKQESDYDFADWDFSGTTQEEYNNL
MAIFRGENKEVYIMDYQHLDVYACRIIVPGMSDIYPADDLIYANNNMGMDWREILLDLPN
WHHDAETYQELLEELDTQGIDDATRVREFIGIVAPKNSGWTTLRIGELKSMLHLAVGELE
QALDWANWTLNMNSSVFTAERVNYYRALISVIELHLDENRKPAQYRPVFEKMYGKDAVQQ
AWAAVAEEGNPFYNLSASDEELKNFKEHQALLNAYEKLQKAKRENWK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacaaacttttattccaggtaaagatgccgcattggaagacagcatttcaaca
tttcaacaaaaattgaccgcacttggttttaatatagaagaagcctcttggctcaaccct
gtgccgaatgtatggtcggtacatattcgtgataaaaattgcccgcaatgcttttcaaac
ggtaaaggggcaagcaaaaaagccgccttagcctctgcccttggcgagtattttgaacgc
ctttccaccaattatttcttcgccgatttctatttggggcaaagcattgcaaacggcgat
tttgtacattatccgaatgaaaaatggtttccgatcaaagatgactcgatgttaccggaa
ggcattttagacgattatttattgaactatttcgatcccaacagtgaactcacgccggaa
ttattagtagatttacaatccggtaatgatgcgcgcggtattgtggcattgccttatgtg
cgtcaatccgatagccaaaccgtttatatcccacaaagcatcattgcaaacctttatgtc
tctaacggaatgtctgccggcaacaccaaatttgaagcgcgtgtgcaaggtttgtccgaa
gtgtttgaacgttatgtgaaaaacaaaatcattgcagaagcaatcagtttgcctgaaatt
cccaccgatgtgatggctcgctttccgtccattcaagcctcaattacaaaattggaagaa
gaaggctttccgatttatgcctttgatgcttcattaggcggtaaatatccggtcatctgt
gttgtgttattaaacccaaataacggtacttgctttgcttctttcggtgcgcatcctaat
tttcaagtggccctggaacgtacggtaacggaacttttacaaggtcgtagcttgaaagat
ttagatgtgttttcaccaccgtctttcaataatgatgatgttgccgatcatgccaatctt
gaaacgcactttattgattcaagcggcttgatttcttgggatctgttcaaacaagaatca
gattatgactttgccgattgggacttcagcggcacaactcaagaagaatataacaacctt
atggcaattttccgtggggaaaataaagaagtgtacattatggattatcaacatctggat
gtgtatgcctgccgtattatcgtgccgggtatgtccgatatttatcccgccgacgatctt
atttatgcgaataacaatatgggaatggactggcgcgaaattttacttgatttaccgaat
tggcatcatgatgcggaaacttaccaagaactgttggaagaattggacacacaaggtatt
gatgatgcaacccgtgttcgtgaatttatcggtatcgttgcccctaaaaacagtggttgg
acaaccttgcgcataggcgaactaaaatccatgcttcatctcgctgtgggcgaattggaa
caagcacttgactgggcaaattggacattgaatatgaatagttccgtattcaccgcagaa
cgtgtcaattattatcgggctttaatcagtgttattgagttacatttggacgaaaatcgc
aaacctgcgcaatatcgccccgtatttgaaaaaatgtatggcaaagatgccgtgcaacag
gcttgggctgccgttgctgaagaaggcaatccgttctataacttatccgcaagcgatgaa
gaattgaaaaatttcaaagaacatcaagccttactaaatgcttacgaaaagttacaaaaa
gccaagcgtgaaaattggaaataa
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