Rodentibacter haemolyticus: IHV77_10570
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Entry
IHV77_10570 CDS
T07810
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rhae
Rodentibacter haemolyticus
Pathway
rhae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IHV77_10570 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhae03019
]
IHV77_10570 (pcnB)
Enzymes [BR:
rhae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
IHV77_10570 (pcnB)
Messenger RNA biogenesis [BR:
rhae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
IHV77_10570 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
QPB42332
UniProt:
A0ABX6UW47
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All DBs
Position
complement(2210490..2212007)
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AA seq
505 aa
AA seq
DB search
MKVQTKITLKTEFIIFTYIKNLFGKKKKPQSQNAPKQSAQIKAHSERIEPSNNASRATKK
INKSPRDDKSIIKAAHFGIHPRMFSRNALSVVEKLQRQGFEAYIVGGCIRDILLGKHPKD
FDVATNARPEQIQNIFQRQCRLVGRRFRLAHIMFGRDIIEVATFRANHDDARGEHQAKQS
NAGMLLRDNVYGTIEQDAERRDFTVNALYYNPQNNTLRDYFRGIEDLKAGKLRLIGDPTI
RYQEDPVRMLRSIRFMAKLDMFLEKSSEEPIRKLAHLLKNVPPARLFDESLKLLQAGHGV
KTYRLLRQYGLFEPLFPSLSAYFTEKEDSFAERMIVTALTSTDERIADKLRINPAFLFAA
FFWYPLREKVELLKNEGGLNNHDAYALAGNEVLDLFCRALAAPRRHTTVIRDIWFLQLQL
LKRTGSAPVRVMEHPKFRAAFDLLVMRAEIEGGETVELAKWWHEYQFSNGEQRNQLVQEQ
QRLHPKPKKKYFRSRKPRKSKSVKL
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttcaaacgaaaattacattaaaaacggagtttattatttttacttatatcaaa
aatttatttggcaaaaagaaaaaaccgcaatcacaaaatgcaccgaaacaatcagcccaa
ataaaagcgcattccgaacgaatcgagccttcaaacaatgcgtctcgagcaactaaaaaa
atcaataaatcacctcgcgatgacaaaagtattattaaagccgcgcactttggtattcat
ccgcgtatgtttagccgtaatgcactcagcgttgtggaaaaattacaacgtcaaggtttt
gaagcctatattgtgggtggttgtattcgcgatattttactgggtaaacacccaaaagat
tttgatgtcgcgaccaatgcccgccccgaacaaattcaaaatattttccaacgtcagtgt
cgcttggtagggcgcagattccgcttggcgcatattatgtttggacgcgatatcattgaa
gtggcgacctttcgagccaatcacgatgatgcccgaggtgaacatcaagccaaacagagt
aacgcaggtatgcttctccgtgataatgtgtacggcaccatcgagcaagatgccgaacgc
cgtgatttcaccgtgaatgcgctttattacaatccgcagaataatacgttgcgtgattat
ttccgtggaattgaagatttaaaagccggtaaattgcgtttgataggtgatccgactatc
cgttatcaagaagatcccgtacgaatgttacgttctattcgctttatggcgaagttggat
atgtttcttgaaaaatcaagtgaagaaccgattcgcaaattggcgcatttactgaaaaat
gttccaccggcacgtttatttgatgaaagtttaaaattgttacaagccggtcatggtgta
aaaacctatcgtttattacgtcaatacggcttatttgagccgcttttcccttctctttca
gcctatttcacagagaaagaagatagttttgccgagcgtatgatcgtaaccgcactcacc
tcaacagatgaacgcattgccgataaactacgcattaatcccgcatttttatttgctgcc
tttttttggtatccgttacgtgaaaaagtggagcttttgaaaaatgaagggggactaaat
aatcacgatgcttatgcccttgccggtaatgaagtgttagatttattttgtcgtgcgctt
gctgcgccacgccgccacaccactgtcattcgggatatttggttcttacaattacaactt
ttaaaacgtaccggttccgcccccgtgcgtgtaatggaacatcctaaattccgtgcggcg
tttgatttattggtaatgcgtgcggaaatcgaaggcggagagacggttgaactggcaaaa
tggtggcatgaatatcaattcagcaacggcgagcaacgaaatcaacttgtgcaggaacaa
caacgcttacatcctaagcctaagaaaaaatattttcgctcacgcaaaccccgtaagtca
aaatccgtgaaattatag
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