Rodentibacter haemolyticus: IHV77_10735
Help
Entry
IHV77_10735 CDS
T07810
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
rhae
Rodentibacter haemolyticus
Pathway
rhae03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rhae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IHV77_10735 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhae03400
]
IHV77_10735 (uvrB)
DNA repair and recombination proteins [BR:
rhae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IHV77_10735 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IHV77_10735 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
UB2H
AAA_30
UvrD-helicase
AAA_22
Ish1
DUF87
Motif
Other DBs
NCBI-ProteinID:
QPB42363
LinkDB
All DBs
Position
2246027..2248063
Genome browser
AA seq
678 aa
AA seq
DB search
MTEKINSKPFILHSDFKPSGDQPQAIEKLAENLDDGLAHQTLLGVTGSGKTFTIANVIAK
LNRPAMLLAPNKTLAAQLYAEMKAFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASI
NDQIEQMRLSATKSFLERRDTIVVASVSAIYGLGDPDSYLKMMLHLQQGAIINQRQILAK
LAELQYTRNDQAFQRGTFRVRGEIIDIFPAESDDIAIRIELFDDEIERLSLFDPLTGQGL
GTVPRYTVYPKTHYVTPRERILDAIEKIKEELVQRREYFIKENKLLEEQRISQRTMFDIE
MMNELGYCSGIENYSRYLSGRNEGEPPPTLFDYMPSDAILIIDESHVTVPQIGGMYRGDR
SRKETLVEYGFRLPSALDNRPLRFEEFERLAPQTIYVSATPGPYELEKSGDEIIDQVVRP
TGLLDPEIEIRPVSIQVDDLLSEARQRADKNERVLVTTLTKKMAEDLTDYLDEHGIRVRY
LHSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSL
IQTIGRAARNLKGKAILYADSITKSMEKAITETNRRREKQMKYNEEQGIVPQALNKKVGE
LLDIGQGVTTKGKSRSRGKIIAEPTALYNAPKNAKEYQHQVKKLEQQMYKFAQDLEFEKA
AAIRDQLHQLREKFVMNE
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaaaattaatagtaaaccttttattcttcactcagatttcaaaccttcgggt
gatcaacctcaagcgattgaaaaactcgcagaaaatttagatgatggtttggctcatcaa
acattgctcggggtaacgggatccggaaaaacatttaccatcgctaatgtgattgcaaaa
ctcaatcgcccggcaatgttgcttgccccgaataaaacccttgctgcacagctttatgct
gaaatgaaagcgttttttcctgaaaatgcagtagagtatttcgtttcttactatgattat
tatcagccggaagcctatgtgccgagtagcgatacttttattgaaaaagatgcttccatc
aatgatcaaatcgaacaaatgcgcctctcggcaacaaaatcttttttggaacgccgcgat
acgatcgtagtcgcatcggtttccgcgatttatggtttgggcgatcccgatagttatttg
aaaatgatgttgcacttgcaacaaggggcaattattaatcagcgtcaaattttggcaaaa
ctggcggaattacaatatacgcgcaacgatcaagcctttcagcgcggaacattccgtgtg
cgtggtgagattattgatattttcccggctgaatcggacgatatcgccatacgtattgag
ttatttgatgatgaaatcgagcgtttgagtttatttgatccgcttaccggacagggatta
gggacagttccacgttatacggtttacccgaaaacgcactatgtaacaccacgcgaacgc
attttagatgcaattgaaaaaatcaaagaggagctggtacaacgccgcgaatatttcatt
aaagaaaataaattgttggaagaacaacgaattagccagcgcacaatgtttgatattgaa
atgatgaatgagcttggctattgctccggcattgaaaactactcgcgttatctttcaggt
cggaatgagggagaaccgcccccgactttattcgactatatgccatccgatgcgatcctc
atcattgatgagtctcatgttaccgtgccccaaatcgggggaatgtatcgtggtgaccgt
tcacgtaaagaaaccttagtggaatacggtttccgcctgccatcggcattggataatcgt
ccattgcgttttgaagaatttgaacgtcttgctccgcaaacgatttatgtatccgctacg
cccggaccttatgaattggaaaaatccggtgatgaaattatcgatcaagtcgtgcggccg
acgggcctactcgatccggaaattgaaattcgtccggtttctattcaggtggatgattta
ctttccgaagctcgtcaaagagcggacaaaaatgagcgggttttagtcactacgctaacc
aaaaaaatggcggaagatcttacggattatttagatgaacacggcattcgcgtgcgttat
ttgcactcggatatagacaccgtagaacgtgtggaaatcatccgtgatttacgtttggga
gaatttgatgtgctggtcggaatcaatttactccgtgaaggattggacattccggaagtg
tcattagtggcaattcttgatgcggacaaagaaggttttttacgttcggaacgctcgctt
attcaaacgattggccgggcggcacgaaacttgaaaggaaaagcgattctgtatgcggat
agcatcacaaaatcaatggaaaaagccatcacagaaaccaaccgccgccgtgaaaaacaa
atgaaatacaatgaggaacaaggcattgttccacaagcactaaataaaaaagtcggtgaa
ttgcttgatatcggacaaggtgttacaaccaaaggaaaaagtagatcacgcggtaaaatc
attgccgaaccgaccgcactttacaatgcgccgaaaaatgcaaaagaatatcaacatcag
gttaaaaaattggaacagcaaatgtacaaatttgcgcaagacttggaatttgaaaaagct
gccgcaattcgtgatcagctccatcagctgagagaaaagtttgttatgaatgagtag
DBGET
integrated database retrieval system
