Entry |
|
Symbol |
recC
|
Name |
(GenBank) exodeoxyribonuclease V subunit gamma
|
KO |
|
Organism |
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:rhal00001]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LQF10_02675 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:rhal03400]
LQF10_02675 (recC)
Enzymes [BR:rhal01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LQF10_02675 (recC)
DNA repair and recombination proteins [BR:rhal03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LQF10_02675 (recC)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(627561..631049)
|
AA seq |
1162 aa
MLHIHRSERTDALVAPLAEVLAEPPEDPFTPDVVAVPTRGIERWLAQRLSHHLGVPDGAG
QAGVCANVRFDSPGRLVQAVLGAATGIDPDEDPWRSARLVWPVLETVDACLDEDWAAPLA
RYVGGGPGTPDGLNSVRQNGGGNVDTVRRSRRVALAQRIARSFSAYAHQRPDLVTAWLEG
SDTDGYGAPVPDDLIWQPALWRRVREHLGSPSPAETLTAALTVLEADPGRVDLPDRLSVF
GPTRLPEDQLRVLRGLAAHREVHLWLPHPSPVVWDAVAGMPLPGVRRADQEPAARHPLLI
SMGSDATELQHRVRQGPSMAYHHPAPEPPATLLGRLQRSLREDQPEPETRPIGEDDRSVQ
VHSCHGRARQVEVLREVLTGLFAADPSLEPRDVVVMCPDVDTFAPLITATFGAAAEGSTD
VHPGQQLRVSLADRGARSTNPVLAVVETLLRLADSRVSAPDVLDLAASTPVRRRFRLSED
DLNRWRTWAVEVGVHWGEDGTRRARYGIDPSVRQGTWDAALDRVLLGVAMAEEDSRYVGA
ALPVDDVGSTDVDVAGRFAELLGRLTHLLARLDGAHSLHHWLDTLEDAVTLLTEPEEPWQ
TIHARRVLAGVRESGAVQGSSADESALLLADVRALLADRLAGRPTRSGFRTGALTVCSLE
PMRAVPHRVVCLLGMDDGAFPRSPTPSGDDLLARDPGLGERDLRSEDRQIFLDAITAAGE
HLVVVHTGADERNGAPRPPAVPVAELVDALDRIATAPGGGGPVRERVVTRHPLQTVDERA
FIPGALGAPGPFSFDVAAFRGARAGRGERITPGVLVTEPLPIPDGGTSVAGEAGPASGRG
DAGLSTVDRPVLDLDELVELLEHPAKWFVRRRLGVLLLRDEDDVDERLPLSAGPLDSWAA
GDRILTAVLAGAEPRQAFQAEWRRGKMPPRQLGNAALLEVMERIRPIHAMATEAARVGSA
VGTDVLAEAGSVLVAGTVPGVHGDRVVRAEYSKLGAKHRLRAWVQVLALAVTEPDRAWHT
VTIGRGESTRYGEDAPAATASHLRPPADPRAVLADLVALHAEASRMPLPIPPKAAQRYAS
ARSRGASADSALEQVRRNWRFDYQGDDAFHLLCFGESASVEQVAGTPSEQDRTRFPEETT
RLGALSRRVWDPLLASEEQTTS |
NT seq |
3489 nt +upstreamnt +downstreamnt
gtgctgcacatccaccgctccgagcgcactgacgcgctggtggcgccgcttgccgaggtg
cttgccgagcccccggaggacccgttcaccccggatgtggtggccgttcccacgcgcggg
atcgaacggtggttggcgcagcgtctgtcgcaccatctcggagttcccgacggcgcaggt
caggcaggcgtgtgcgcgaacgtccggttcgactcacccgggcggctggtgcaggccgtg
ctcggggccgccaccggaatcgacccggacgaggacccgtggcgctcggcccggctggtg
tggccggtgctggagacggtcgacgcttgtctggatgaggactgggctgctcccctggcc
cggtacgtcggcggggggcccggcacacccgacgggctgaacagtgtgcgccagaacggt
ggcgggaatgtcgataccgttcgccggtcccggcgggtggcgctggctcagcggatcgcc
agatcgttctccgcctacgcccaccagcgcccggacctcgtgacggcatggctcgagggg
agtgacaccgacggctacggtgcccccgtcccggacgacctcatttggcagccggccctg
tggcggcgggtgcgcgagcacctcggctccccgagtccggccgagaccttgaccgcggcg
ctgacggtgctcgaggccgaccccggccgggtggacctgcccgaccggctctcggtgttc
ggccccacccgtctgccggaagaccaactccgggtgctccgcggcctcgccgcgcaccgg
gaggttcacctctggctgccgcacccctccccggtggtgtgggacgccgtcgccggcatg
ccgctgcccggggttcgccgggcggaccaggaaccggcggcccggcatccgttgctcatc
tcgatgggcagcgatgccaccgagttgcagcaccgggtgaggcagggaccgtccatggcg
taccaccatccggcaccggagcccccggccacgctgctggggcggttgcagcgctcgctg
cgcgaggaccagccggaaccggagactcgtcccatcggcgaggatgaccgcagcgtgcag
gtgcacagttgccacggccgggcacgccaggtggaggtgctccgcgaagtcctcaccggt
ttgttcgccgccgatccgagcctcgagccccgggacgtggtggtgatgtgcccggatgtg
gacaccttcgccccgctgatcacggcaacgttcggcgccgcggccgagggcagcaccgac
gtccatccgggtcagcagttgcgggtcagcctcgccgaccgcggggcacgcagcacgaac
ccggtgctcgccgtggtggagacactgctacggctcgcagacagccgcgtgagcgccccg
gacgtgctggatctggcggcatcgaccccggtacggcgccggttccggctgtctgaggac
gatctgaatcgttggcgcacctgggccgtcgaggtgggggtgcattggggcgaggacggc
acccgtcgcgcccggtacggtatcgacccctcggtccggcaaggcacctgggatgctgcc
ttggatcgcgtgctgctcggggtggcgatggcggaggaggactcgcgttacgtgggggcg
gcgctgccggtggacgatgtcggctccaccgatgtggacgtcgccggccggttcgccgag
ttgctcggccggctcacccatctcctggccaggctcgatggtgcgcactcgctgcaccac
tggttggacacgctcgaggacgctgtgaccctgctgaccgaaccggaggagccgtggcag
acgatccacgcgcgccgggtcctcgccggggtgcgggaatcgggagcggtgcagggatcg
agcgccgacgagtcggcattgctgctggccgacgtgcgcgcgctgctcgccgatcgcctg
gcaggccgtcccacccgctcgggctttcgaacgggggcgctgacggtgtgctcgctggag
ccgatgcgggccgtcccgcaccgcgtggtgtgcctgctggggatggatgacggtgccttc
ccccgctcccccacgccgagcggggacgatctgctggcccgggaccccggcctgggcgag
cgtgacctgcgcagcgaggaccggcagatcttcctggatgcgatcaccgccgccggcgag
cacttggtggtagtgcacaccggcgccgacgaacgcaacggcgcacccagaccgcccgcg
gtgccggtggccgaactggtggatgcgctggaccggatcgcgaccgcaccgggcggcggc
gggccggtccgcgagcgggtggtgacccgccatccgctccagacagtggacgagcgcgcg
ttcatcccgggggcgctcggtgcaccgggcccgttcagtttcgacgtggccgcgttccgc
ggcgcccgagccgggcgaggtgagcgaatcaccccgggcgtcctggtcaccgaaccgtta
ccgattcccgacggcggaacgtccgtggcgggcgaggctggccctgctagtggccggggc
gatgcgggcctgagcacggtcgatcgtcccgtgctcgacttggacgagctggtggaactg
ctcgagcatcccgccaaatggttcgtccggcgacgcctgggtgtgctgttgctgcgcgac
gaggacgacgtggacgagcgcctgccactgagcgcggggccgctggactcctgggcagcg
ggggaccgcatcctcactgcggtgctggcaggggcggagccgaggcaggcgttccaggcg
gagtggcgccgcgggaagatgcccccgcggcagctggggaacgcggccctgctggaggtg
atggagcggattcgtccgatccacgccatggccaccgaggcggcgcgcgtgggcagcgct
gtcgggacggacgtgctggccgaggccggatccgtgctcgtcgccgggaccgtgcctggc
gtgcatggcgatcgggtggtgcgggcggagtactccaagctcggggccaagcatcgcctg
cgggcatgggtgcaggtgctggcgttggcggtgaccgagccggaccgtgcctggcacacc
gtgaccatcggccgaggtgagagcaccaggtacggcgaggacgccccggcggcgacggcc
agccacctccgcccgccggcagatccgcgggcggtgctcgccgacctggtggcgctgcat
gccgaagcgtcgcggatgccgctgcccatcccaccgaaggcggcgcagcggtacgcgagc
gcccgctcgcgtggcgccagcgccgactccgcgctggaacaggtgcgccggaattggcgg
ttcgactaccagggtgatgatgccttccacctcctgtgctttggggagagtgcgagcgtg
gagcaggtggcggggacgccgtcggagcaggaccgcacgcgcttcccggaggagaccaca
cgactgggggcgctgtcccggcgggtgtgggatccattgctcgcgagcgaggagcagacc
acctcatga |