Ruania halotolerans: LQF10_03680
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Entry
LQF10_03680 CDS
T08257
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rhal
Ruania halotolerans
Pathway
rhal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LQF10_03680 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhal03019
]
LQF10_03680 (groL)
03110 Chaperones and folding catalysts [BR:
rhal03110
]
LQF10_03680 (groL)
03029 Mitochondrial biogenesis [BR:
rhal03029
]
LQF10_03680 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhal04147
]
LQF10_03680 (groL)
Enzymes [BR:
rhal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LQF10_03680 (groL)
Messenger RNA biogenesis [BR:
rhal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LQF10_03680 (groL)
Chaperones and folding catalysts [BR:
rhal03110
]
Heat shock proteins
HSP60 / Chaperonin
LQF10_03680 (groL)
Mitochondrial biogenesis [BR:
rhal03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LQF10_03680 (groL)
Exosome [BR:
rhal04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LQF10_03680 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LQF10_03680 (groL)
Exosomal proteins of breast cancer cells
LQF10_03680 (groL)
Exosomal proteins of colorectal cancer cells
LQF10_03680 (groL)
Exosomal proteins of bladder cancer cells
LQF10_03680 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UFU07222
LinkDB
All DBs
Position
851781..853415
Genome browser
AA seq
544 aa
AA seq
DB search
MAKQIAFNEEARRGMERGLNILADTVKVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIE
LEEPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVVAGANPIALKRGIE
KAVEAVTAELLSSATEVETKKQIAATAGISAGDPQIGELIAEALDKVGKEGVITVEESNA
LGLELELTEGMRFDKGYLSAYFVTDQDRQEAVLEDAYVLLVESKISSVKDMLPLLEKVIQ
SGKQLLIIAEDVEGEALATLVLNKIRGTFKSVAVKAPGFGDRRKAMLNDIAILTGGQVVS
ETVGLKLDNVGLEVLGTARQVVVTKDETTIVEGAGDADAIAGRVAQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALIQA
AAAAFATLELEGDEATGASIVQIAVDAPLKQIAVNAGLEGGVVVEKVRGLETGHGLNAAT
GVYEDLLAAGINDPVKVTRSALQNAASIAALFLTTEAVVADKPEKAPAAPAGGDDMGGMG
GMGF
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcagatcgctttcaacgaggaggcccgtcgcgggatggagcgtggactcaac
atcctcgccgacaccgtcaaggtcaccctcggcccgcggggacgcaatgtcgtcctcgag
aagaagtggggcgctcccacgatcaccaacgatggtgtgtccatcgccaaggagatcgag
ctcgaggagccctacgagaagatcggtgcagagctcgtcaaggaggtcgccaagaagact
gacgacgtcgcaggcgacggcaccaccaccgccaccgttctcgcccaggcgctcgtgcgc
gagggcctgcgcaacgtggtggccggcgccaacccgatcgccctcaagcggggtatcgag
aaggccgtcgaagccgtgaccgctgagctgctcagctccgccaccgaggtggagaccaag
aagcagatcgcggccaccgccggcatctccgccggtgacccgcagatcggtgaactgatc
gccgaggccctcgacaaggtgggcaaggaaggcgtcatcaccgtcgaggagtccaacgcc
ctgggcttggagctcgagctcaccgaggggatgcgcttcgacaagggctacctgtcggcg
tacttcgtgaccgaccaggaccgccaggaggcggtgctggaggacgcgtacgtcctgctc
gtcgagtccaagatctccagcgtcaaggacatgctgccgctcctggagaaggtcatccag
tccggtaagcagctgctgatcatcgccgaggacgtcgagggcgaagccctggccaccctg
gtgctcaacaagatccgtggcaccttcaagtccgtggccgtcaaggcaccgggcttcggc
gaccgccgcaaggccatgctcaacgacatcgccatcctcaccggtggtcaggttgtctcc
gagaccgtgggcctcaagctcgacaacgtcggcctcgaggtgctcggtaccgctcgccag
gtcgttgtgaccaaggacgagaccacgatcgttgagggtgccggcgacgccgacgccatc
gccggacgggtcgcgcagatccgcgccgagatcgagaactcggactcggactacgaccgc
gagaagctgcaggagcgcctggcgaagctcgccggcggtgtggcagtcatcaaggccggt
gccgccaccgaggtggagctcaaggagcgcaagcaccgcatcgaggacgccgtccgtaac
gcgaaggctgccgttgaagagggcatcgtcgccggtggtggcgtggccctgatccaggct
gctgccgccgcgttcgccaccctcgagctcgagggtgacgaggcaaccggtgcatccatc
gtgcagatcgccgtggacgccccgctcaagcagatcgccgtgaacgccggcctcgagggc
ggcgttgtggtggagaaggtgcgtggcctggagaccggtcacggcctgaacgccgccacg
ggtgtctacgaggacctgctcgctgcagggatcaacgacccggtgaaggtgacccgttcc
gcactgcagaacgctgcctccatcgccgcactgttcctcaccaccgaggccgttgtggcc
gacaagccggagaaggcccccgcggcaccggccggtggcgatgacatgggcggcatgggc
ggcatgggcttctga
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