KEGG   Ruania halotolerans: LQF10_08440
Entry
LQF10_08440       CDS       T08257                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
rhal  Ruania halotolerans
Pathway
rhal03030  DNA replication
rhal03410  Base excision repair
rhal03420  Nucleotide excision repair
rhal03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rhal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LQF10_08440 (polA)
   03410 Base excision repair
    LQF10_08440 (polA)
   03420 Nucleotide excision repair
    LQF10_08440 (polA)
   03440 Homologous recombination
    LQF10_08440 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rhal03032]
    LQF10_08440 (polA)
   03400 DNA repair and recombination proteins [BR:rhal03400]
    LQF10_08440 (polA)
Enzymes [BR:rhal01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LQF10_08440 (polA)
DNA replication proteins [BR:rhal03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     LQF10_08440 (polA)
DNA repair and recombination proteins [BR:rhal03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     LQF10_08440 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LQF10_08440 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 DNA_pol_A_exo1 HHH_5 DNA_pol_lambd_f HHH PDDEXK_5
Other DBs
NCBI-ProteinID: UFU08107
LinkDB
Position
1918051..1920747
AA seq 898 aa
MRSRLSGVSDTARPRLLLIDGHSMAYRAFFALPAENFSTTTGQTTNAVYGFTSMLINLLR
DEAPTHVAVAFDVSSQTFRKETYADYKGTRDETPQEFRGQIPLIEEVLAALGITTLGREG
FEADDIIATLSTQAVAAGYEVLICSGDRDTYQLVNETVTVLYPRKGVSDLVRMTPIAVQE
KYGVSPAQYSDLAALVGETSDNLPGIPGVGPKTAAKWILAYDGLEGIVANAPSIPGKAGQ
GLRDHLDQVLLNRQLNQLLLDMDLPVGVDDLPRRPFEREQVHQVFDALEFRVLRDRLFEM
EPQDAESATAESFDLDITAMTPGTLTDWLGTHATGRVGVDVRGSVASGSGDAWGMAIAAE
GGAVLTVDLTEISPDDESALATWLADEQREKVLHDAKAGWHCLDGRGLTLAGVTFDTATA
AYLCHPDQRSYALADLTVRFLGRELRNEDGDGAQQMLVLDGPDEAELSAVRAAAVIDLAG
VLTDQLTERDSQALLTDLELPVAGVLAQMEKAGIAADSEYLQGLEREFDQHVRDAAAQAY
KVIGREVNLSSPKQLQEVLFTDLEMPKTRKTKTGYTTDADALADLYTKTEHPFLEHLLTH
RDQIRLRQTVEGLLRTVAPDGRIHTTYSQTIAATGRLSSAEPNLQNIPIRTEEGHRIRAA
FVVGEGYESLLTADYSQIEMRIMAHLSGDEGLIEAFRSGEDLHSFVGSRVFGVDPADVTA
PMRSKIKAMSYGLAYGLSAFGLSKQLKIETGEARGLMEEYFERFGGVRDYLASVVDDARV
NGYTQTILGRRRYLPDLTSDNRQRREMAERMALNAPIQGSAADLIKVAMIGVQAAFAERG
LGSRLLLQVHDELVVEVAPGEAEAAEAVLREQMGAAAELAVPLEVSVGTGANWRDAGH
NT seq 2697 nt   +upstreamnt  +downstreamnt
atgcgctctaggctgtcaggtgtgagtgacactgcgcgaccccggctcctgctcatcgac
gggcattcgatggcctaccgtgccttcttcgccctcccggctgagaacttctcgaccact
accgggcagacgacgaacgccgtctacggcttcacctcgatgctgatcaacctgctgagg
gacgaggcacccacgcatgtggccgttgctttcgatgtctccagccagaccttccgcaag
gagacgtatgcggactacaagggcacccgggatgagacgccccaagagttccgtgggcaa
atcccactgatcgaggaggtgctcgcggcactcgggatcaccacgctcggccgcgagggt
ttcgaggccgatgacatcatcgccacgctgtccacccaggcagttgccgccggctatgag
gtgctcatctgctccggggaccgggacacctaccagctggtcaacgagacggtcaccgtg
ctctacccgcgcaagggtgtctccgacctcgtccggatgactccgatcgccgtccaggag
aagtacggcgtctcacctgctcagtacagcgaccttgccgcgctggttggcgagaccagc
gacaacctcccgggtatccccggtgtcggaccgaagacagccgcgaagtggatccttgcg
tacgacggactcgaaggcatcgtcgcgaatgcgccatcgatccccggcaaggccgggcag
ggcctacgcgaccacctcgaccaggtgctgctgaaccgccagttgaaccagctcctgctg
gatatggatcttccggtcggtgtggacgacctcccgcggcgcccgttcgagcgtgagcag
gtgcaccaggtcttcgacgcgctcgagttccgtgtgctgcgggaccgactgttcgagatg
gagccgcaggacgccgagtccgcgacggccgagtccttcgacctggacatcaccgctatg
acgccaggcacgttgacagactggctgggcacacacgccaccggccgcgtgggtgtggat
gtccggggcagtgtggcctccgggagcggggacgcctggggcatggccatcgcggccgag
gggggagctgtgctcaccgtggacctcaccgaaatcagccccgacgacgagagcgccctg
gccacctggctcgccgacgagcagcgggagaaggtgttgcacgacgccaaggccggctgg
cactgcctggacgggcgtggcctgacacttgccggggtcaccttcgacaccgccaccgcg
gcctatctgtgccaccccgaccagcggtcctacgccctggccgacctcacggtccggttc
ctcggccgcgagctgcgcaatgaggacggtgatggtgcccagcagatgctcgttctcgac
gggccggacgaggcggagttgagcgccgttcgcgccgctgccgtgatcgacctcgccgga
gtactcaccgatcagttgaccgagcgggactcacaggccctgctgaccgatctcgaactt
ccggtggccggggtactcgcacagatggagaaggcggggatcgcggctgactcggagtac
ctccagggtctggagcgtgagttcgatcagcacgtccgggacgctgccgctcaggcatac
aaggtgatcgggcgcgaggtgaatctcagctcaccgaagcagcttcaggaagtgctcttc
accgatctggagatgcccaagacccgtaagaccaagacgggttacaccactgacgccgat
gctctcgccgatctgtacaccaagaccgagcatccgttcctggagcatctgctcacccac
cgggaccagattcggctgcggcagaccgtggaaggactgctgcggacagtggccccggat
ggccgcatccacaccacgtactcgcagacgatcgcagccaccgggcgcctctcctcggca
gaaccgaatctgcagaacatcccgatccggaccgaggaggggcaccggatccgggccgcg
ttcgtggtgggcgagggatacgaatcgctgctcaccgctgactactcccagatcgaaatg
cggatcatggctcacctctccggcgatgagggcctgatcgaggcgttccgttccggggag
gacctgcactccttcgtcggctcacgagtcttcggggtggaccctgcggacgtcaccgca
ccgatgcggtcgaagatcaaggcgatgtcctacggcctcgcatacggcctcagcgcgttc
ggactgtccaagcagctcaagattgagaccggcgaggcgcgcgggctgatggaggagtat
ttcgaacgattcggcggagtgcgcgactacctcgcctcagtggtggacgatgctcgggtg
aacgggtacacccagacgattcttggacgtcgtcgatacctgcccgatctgacgagtgac
aaccgtcagcgccgagagatggccgaacggatggcactcaacgcaccgatccagggcagc
gctgcggacctgatcaaggtcgcgatgatcggcgtgcaggcggctttcgccgagcgcggg
ctcggttcgcggttgctgcttcaggtgcacgatgaactggtcgtggaggttgcaccgggg
gaggccgaggcagctgaggccgtcctacgggagcagatgggcgcggccgccgagctggcc
gtcccgcttgaggtgagcgtgggcactggggcgaactggcgcgacgccgggcattga

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