Ruania halotolerans: LQF10_09950
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Entry
LQF10_09950 CDS
T08257
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rhal
Ruania halotolerans
Brite
KEGG Orthology (KO) [BR:
rhal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhal03032
]
LQF10_09950
03400 DNA repair and recombination proteins [BR:
rhal03400
]
LQF10_09950
Enzymes [BR:
rhal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LQF10_09950
DNA replication proteins [BR:
rhal03032
]
Prokaryotic type
DNA Topoisomerases
LQF10_09950
DNA repair and recombination proteins [BR:
rhal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LQF10_09950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Inp1
Motif
Other DBs
NCBI-ProteinID:
UFU04810
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All DBs
Position
2243735..2246209
Genome browser
AA seq
824 aa
AA seq
DB search
MARRSTPGPEQTPVDSIVIDTDVSTEMRGSFLEYAYSVIYSRALPDARDGLKPVHRRILF
QMAEMGLRPDRGHVKSARVVGEVMGKLHPHGDGAIYDALVRMAQSFSLRLPLVDGHGNFG
SLDDGPAAPRYTEARLAPAALVMTADLNEDVVDFVPNYDSQLTQPEVLPSALPNLLVNGA
SGIAVGMATNMPPHNLVEVVAAARHLIAHPDADLEALMRFVPGPDLPGGGKIVGLDGIRE
AYATGRGSFRTRATARVESLTPRKKGIVVTELPYQVGPERVIEKIKDAVQAKKLQGIAAV
NDLTDRAHGLRLVIEVKNAFNPEAVLAQLYRLTPLEESFGINNVALVEGQPRTLGLRELL
QVYVAHRLTVVRRRCEFRLAKRRERAHLVEGLLIAIADIDEVISVIRTSDDAESARARLM
AVFDLSEAQAEYILELRLRRLTKFSRIELEAERDELAKEIEALEEILGDEGLLRDVVSDE
LARVAAEHGTPRRTVLLEASGATATAESHQSRARQGRGNDVPLEIADTPCRVLLSATGLL
VRTADAAEPTRAGARSAHDALHATVRATTRGEVGAVTSRGRMLRLSVIEVPALPPTDAAP
SLSGGVPVSEVLMLEPGERVVGLARLDDDAVPLTLGTRSGQVKRVTPDYPRKEVWDVISL
KDGDEVVGAADAADEDELVFVSSEGQLLHFPAALVRPQGRGAGGMAGIKLGGGAVVVSFT
ALPAGRTDEAVVVTVSGSSTALPGTVPGSAKVTPFALFPGKGRATGGVRAHRFLRGEDSL
VLAAVGPDPIRAVGSAGQPVDLPELDERRDGSGRPLDVSIAGLG
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggcacgccgcagcacgcccggaccagagcagaccccggtcgactccatcgtcatcgat
accgacgtctccaccgagatgcgtggttcgttcttggagtacgcctactcggtgatctac
tcccgtgcccttcccgatgcgcgggacgggttgaagccggtgcaccgtcgcatcctgttt
caaatggccgagatggggctgcggcccgaccgtgggcatgtgaagtcggcccgggtggtc
ggtgaggtcatgggcaaactgcacccgcacggcgacggtgccatctatgacgccctcgtg
cggatggcgcagtcattctcactgcgactgccgctggtcgacggtcacggcaacttcggg
tccttggacgatggccccgcggccccgcggtacaccgaggcgcggctggcgccggcggcc
ctggtgatgaccgcggatctcaacgaggacgtcgttgatttcgttcccaattacgacagc
cagctgactcagccggaggtgctgccctccgcgcttccgaacctgctggtcaacggtgcg
tccgggatcgccgtcggtatggccaccaacatgcctccgcacaatctcgtcgaagtggtc
gccgcggcgcggcatctgatcgctcatccggatgccgatctggaggcgctgatgcggttc
gtgcctggcccggacctgccaggcgggggcaagatcgtcgggttggacggaatccgggag
gcgtatgccaccggtcgcggttcattccgcacccgggctacggcccgagtggagagcctc
acccctcgcaagaagggaatcgtggtcaccgagctgccgtaccaggtgggcccggaacgg
gtcatcgagaagatcaaggacgccgtccaggcaaagaaactccagggcatcgcagcggtg
aacgatctcaccgaccgcgcccatgggctgcggctggtgatcgaggtgaagaacgccttc
aaccccgaagccgtgctcgcccagttgtaccggctcaccccgcttgaggagtctttcggg
atcaataacgtggcgctggtggagggccagccgcgcactctcgggctacgtgaactcctt
caggtctacgtcgcgcaccggctcaccgtggtacgccgccggtgcgagttccggctcgcc
aaacggcgcgagcgtgctcaccttgtcgagggcctgctcatcgccatcgcggacatcgac
gaggtgatctcggtgatccgcaccagcgatgacgccgaatctgcgcgcgctcgcctgatg
gcagtcttcgacctttctgaggcccaagccgagtacatcctcgaactgcgcctgcggcgg
ctgacgaaattctcccggatcgaactcgaggccgagcgagacgagctggccaaggagatc
gaggcgctcgaagagatcctcggcgacgaaggcctactccgggatgtggtctcggacgaa
ctggcccgcgtagcagctgagcatggaacgccgcgacgtacggtcttgctggaagcttcc
ggtgccaccgccacggcggagtcccaccagtctcgtgcacggcagggtcgtggcaatgac
gtcccgctggagatcgccgacactccgtgccgagtcctgctctcggcgaccggtctcctc
gtccggaccgcggacgctgccgaaccgactcgagccggtgcccgcagcgcacacgacgcg
ctgcacgccaccgtgcgggcaactacccgaggtgaagtcggcgcggtcaccagccgtggc
cggatgttgcgactgtcggtgatcgaggtgcccgccctgccgcccaccgacgccgcgcct
agcctctcgggtggtgttccggtcagcgaggttctgatgctggagccgggcgagcgggtg
gttggtctggcgaggctggacgacgatgctgtcccgctcacgttgggcactcgatcgggc
caggtcaagcgggtgactcccgattacccccgcaaggaagtctgggacgtgatctcactc
aaggacggtgatgaggtcgtcggtgccgccgacgccgcagacgaggacgagctggtgttc
gtctcctcggaggggcaactcctgcacttcccggccgcgctcgtacggccccagggacgt
ggtgccggtgggatggcagggatcaagctcggcggcggtgcagtggtcgtctcgttcacg
gccttacctgccgggcgcaccgatgaggccgtagtggtgacggtatccggttcgtccacc
gcgctgcccggcactgttcccgggtccgcgaaggtcacccccttcgccctgttccctggc
aagggcagggcgaccggtggcgtccgcgcccaccggttcctgcgtggagaggactccctg
gtgctggcagctgtgggaccggaccccatccgcgccgtcggttcggccggccagcccgtg
gacctgccggaactggacgaacggcgggatggatcaggtcgtccgctggacgtctccatc
gccggtctggggtga
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