Ruania halotolerans: LQF10_09970
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Entry
LQF10_09970 CDS
T08257
Name
(GenBank) type IIA DNA topoisomerase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rhal
Ruania halotolerans
Brite
KEGG Orthology (KO) [BR:
rhal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhal03032
]
LQF10_09970
03400 DNA repair and recombination proteins [BR:
rhal03400
]
LQF10_09970
Enzymes [BR:
rhal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LQF10_09970
DNA replication proteins [BR:
rhal03032
]
Prokaryotic type
DNA Topoisomerases
LQF10_09970
DNA repair and recombination proteins [BR:
rhal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LQF10_09970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
KH_DEAH11_1st
Motif
Other DBs
NCBI-ProteinID:
UFU04814
LinkDB
All DBs
Position
complement(2248738..2250864)
Genome browser
AA seq
708 aa
AA seq
DB search
MSKTSTDASYTARHLSVLEGLEAVRKRPGMYIGSTDSRGLMHCVWEIIDNAVDEALEGHG
NAIEIVLHPDNSVEVRDNGRGIPVDNVTALGLSGVEVVFTKLHAGGKFGGGSYASSGGLH
GVGASVVNALSSRLDVEVDRGGATYAMSFHRGEPGTFDDTGAVSPESPFTPFTDHSELRK
VGKVKRGVSGTRVRYWADRQIFPASAAFSYDELITRARQTSFLVPGLQLTVRDERRLMGT
PGEDGPVEEVFRHDGGVSDFVEFLSADTAITDTWRLSGQGTFTETVQQLDDKGHLRPVEV
ERTCEVEIALRWGIGYDTEVRSFVNIIATPKGGSHLSGFEQGLVKAVRKQIEANARRLKL
TGKSGKERIEKDDVMAGLTSVVTVRLPEPQFEGQTKEVLGTAPVRGIVAKVIDTEITALL
TSAKRTEKAQAATLLEKVVGEMRARIAARTHKEISRRKNALETSTLPAKLADCRSDDVER
SELFIVEGDSALGTAKLARQSDFQALLPIRGKILNVQKASLADMLKNAECASIIQVIGAG
SGRSFELDAVRYGKIVLMTDADVDGAHIRTLLLTLFFRYMRPLVEAGRVFAAVPPLHRVE
TTAQGKRKGSITYTYSEAELRQLLRTLEKAGRRYKEPIQRYKGLGEMDADQLAETTMDPA
HRTLRKITMDDIEAAETVFDLLMGNDVAPRKDFIIAGANELDRDRIDA
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaaaacttccacggatgccagctacaccgctcgtcacctctcggtgctcgagggc
ctcgaagctgtgcgcaagcgccccggcatgtacatcggctccaccgactcgcggggcctc
atgcactgtgtgtgggagatcatcgacaatgccgtggacgaagccctcgaagggcacggc
aacgcgatcgagatcgtgctccatccggacaactcggtggaggtccgcgacaacgggcgc
ggcatccccgtggacaacgtgacggccttgggcctgagcggtgtcgaagtggtcttcacc
aaactgcacgccggcggcaagttcggagggggctcctacgcctcgtccggcggtctgcac
ggtgtgggcgcctccgtggtgaacgcactgtcgtcccgcttggacgtcgaggtagaccgg
ggtggggccacctacgccatgtcgttccatcgcggcgaaccggggacgttcgacgatacc
ggtgcagtgtcaccggagtcacccttcacgccgttcaccgatcactcggagttacgcaaa
gtcggcaaggtgaagcgtggtgtgagcggtacccgggtgcgctactgggccgatcgtcag
attttcccggcgtcggcagcattctcctatgacgagctcatcacgcgggcgcggcagacg
tctttcctggtaccagggctgcaactgacggtgcgggacgaacggcgtttgatgggcaca
cctggcgaagacggcccggtggaggaggtcttccgtcatgacggcggagtcagcgacttc
gtcgagttcctctcggccgacacggccatcaccgacacctggcggttgagtggccagggc
acgttcacggagacggtgcagcagttggacgacaagggtcacctgcgcccggtcgaggtc
gaacgcacctgtgaggtggagatcgcactccgttggggcatcggctacgacaccgaggtt
cgcagcttcgtgaacatcatcgccaccccgaagggcggctctcacttgagcggctttgaa
cagggcctggtcaaggcggtccgcaagcagatcgaggccaacgcccgccgattgaaactc
actggcaagagcggcaaggaacgcatcgagaaggacgatgtgatggccggcctgacctcc
gtcgtcaccgtgcgtctgccggagccccagtttgaggggcagaccaaggaagtgctcggc
accgcaccggtgcgtggcatcgtcgccaaggtgatcgacaccgagatcaccgctctgctc
acttctgccaagcgcaccgagaaggcgcaggctgcaacgttgctcgagaaggtcgtcggc
gagatgcgggcacgtatcgcggcacgcactcataaggagatctcgcggcgcaagaacgcg
ctggagacctcaaccctgcccgcgaagctggccgactgccgcagtgacgatgtggaacgc
tcggagttgttcatcgtcgagggtgacagtgctctgggcaccgccaagctggcgcggcag
tccgacttccaagcgctgctgccgatccgtgggaaaatcctgaacgttcagaaggcttct
ctcgcggatatgctcaagaacgctgaatgcgcctcgatcatccaggtgatcggagcggga
tccggtcgttcgttcgagcttgatgccgtgcgctacggcaagatcgtgctgatgaccgac
gcggacgtcgacggcgcccacatccgcacgttgctgctgaccctcttcttccggtacatg
cgaccactggtcgaggcgggccgcgttttcgctgctgtgccgccattgcaccgagtggag
acgaccgctcagggcaagcgcaagggttctatcacctatacgtactccgaggccgagttg
cgccagctgctccgtaccctggagaaggcgggccgccgctacaaggagccgatccagcgc
tacaagggtctgggggagatggacgccgaccagctcgccgaaaccaccatggatcctgcc
caccggaccctacgcaagatcacgatggacgacatcgaggcggccgagacggtgttcgat
ttgctcatgggcaacgatgtggcgccgcggaaggacttcatcatcgccggcgccaacgag
ctggacagggatcggatcgacgcgtga
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