Ruania halotolerans: LQF10_11840 Help Entry LQF10_11840       CDS       T08257                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism rhal  Ruania halotolerans Brite KEGG Orthology (KO) [BR:rhal00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:rhal03400]     LQF10_11840 Enzymes [BR:rhal01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      LQF10_11840     5.6.2.6  RNA 3'-5' helicase      LQF10_11840 DNA repair and recombination proteins [BR:rhal03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     LQF10_11840 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WHD_Lhr WHD_2nd_Lhr DEAD WHD_3rd_Lhr WHD_4th_Lhr Helicase_C ResIII DUF6406 NAD_binding_3 AAA_22 Helicase_C_3 Mg_chelatase Motif Other DBs NCBI-ProteinID:  UFU05162 LinkDB All DBs Position 2665808..2670937 Genome browser AA seq 1709 aa AA seqDB search MTTSAVLTRFSEPTRTWFSRAFEAPTDAQIGAWEAIASGEHALVVAPTGSGKTLAAFLSA LDRLLTEEQPSERARRCRVLYVSPLKALAADVERNLRSPLVGVTQAATASGTSVNDVQVG VRTGDTPAAERRSFATKPPDILITTPESLFLMLTSSAREGLRGVEAVIVDEVHALAGNKR GAHLALSLERLDALLERPAQRIGLSATVRPAEAVATYLCGMRSIDDGGRPVRTVQPRVAK QLQVDVVVPVPDLADLPGSTRVIGATGTAATAGAAGASRDVGAEASDAFSSTGTDSSGAS GGAGASASAGTDAHSIEPDLSGDAAGMVPEGRTRPAPSGGSATDRGSIWPHVTERVVDLI TSHTSTIVFTNSRRGAERLAARINECYAERLGLGSDLDPGSAWAAEIPAQSGTSLPRSPE LPAEAIIARPHHGSMSRDERTATETALKNGTLPAVVATSSLELGIDMGAVDLVVQVGAPP SVASALQRIGRAGHHVGALSHGVVLPTHRGDLLAAATTAVRARAGAIEAVHVPTNPLDVL AQQIVAMCAQETWDVHELAALVRRAASFDGLSERVLTAVLDMLAGRYPSEEFAELRPRLV WDRVAGTVTGRPGTLRLAATSGGTIPDRGLYGVYVVGEQASARGGKRVGELDEEMVYESR VGDTFTLGSSTWRIEDITPDRVLVSPAPGLPGRLPFWKGDRPGRPAELGQAIGAMMRELA ESGLSAESVESWGLDDWAAENLLAYLRDQERATGRLSTDRTLVVERFRDELGDWRVVIHS PYGAEVHAPWALILTARLREQFGMDVSAMHADDGIVLRLPDTDAAWAWGGDPYGPAGGGQ HAPADGGPEQPRAAGELTLEDLLLDPDRIEADAMAALSGSAHFAARFREAAARSLLLPPR RPDRRQPLWQQRQRSAQLLAVAADYGDFPVVLEAVRECLQDDYDVGALIDLMRRVRGRDI HVVEVSTPTPSPFAQSLLFGYVAQFLYGEDTPLAERRAAALTLDADLLADLLGDGAEIAD LLDPEALASVEAEVGWRTESSLARDPESLLELIRRLGPLDDEGLTLRSIEASAVPAWLSE LHERRRILPVRVSGELRWAVLEDAGRLRDALGTALPTGLPEALTAPVPRALEDLVRRYAR AHGPFRAGQLAQWYGLGVATVTPVLTELVRRGAVTAGTLRPQETHSAASLAMTGPDYCDA DVLRRIRRRSLAALRAEVEAVPPERFGIYLPRWHQVRSLRGVDGVLTAIDQLAGTPVAAS AWESLVLPARVSDYTPDMLDELTTSGEVVWVGAGSGPGADGFVALLPVDTVADLAPATEH PVTTPVHQAVLDVLSHGGGLFFRDVVAAVREAWTDREPTAPAVQMGTPDTAAPPGAGHPP VASEAPGATIETDAAGPVNRPGTADPLSPVRRDGAAPSAEDILTALWECVWDGRATNDSL APLRARLGAKPRPGTRTTRRARPRGRSLRTMRPALPVPDTAVGRWSAVVDRSDAGRRATF AALALLDRDGLVTRGSAALAVPGGFGTAYRALATLEENGQVRRGYFVEGLGAAQFALGDA VERLRGAGSEPVGPHTHPDTDTTLLLAATDPANPYGAALTWPEPVGLAEASSAHRPGRKV GASVVLVAGVPVLYLERGARSVLSFTRDRRPLDAAAAELVRAAMAGTLGRFTVAKVDGGA ALGSSSPAAEALLAAGFLATPSGLRIRRR NT seq 5130 nt NT seq  +upstreamnt  +downstreamnt gtgaccacatcggctgtactcacacggttcagcgaaccgacccgcacctggttcagccgt gccttcgaagcacccaccgacgcccagatcggtgcatgggaggcaatcgcctccggggag cacgcgctcgtcgtggcccccaccggctcaggcaagacccttgccgccttcctctccgcc ttggacaggctgctcaccgaggagcagccgagcgagcgggcacgccgatgtcgggtgttg tacgtctccccactgaaggcgttggcggcagacgtcgaacggaacctgcgctccccgctc gtcggcgtcacgcaggcggcgacggcgtccggcacgtcggtcaacgatgtgcaggtgggt gttcgcaccggtgacaccccggccgcggaacgccgttcgttcgcgaccaaaccaccggac atcctgattaccacgccggagtcactgttcctcatgctcacctcatccgcgcgagagggc ctgcggggcgtggaggccgtgatcgtcgatgaggtgcacgctctcgcgggaaacaagcga ggtgcgcatctggcgctctccttggagcgcctcgacgcactccttgagcggccagcgcag cggatcgggctctcagccactgtccggcccgccgaagcagtagccacctacttgtgcggt atgcgatcgatcgatgacggcggccggcctgttcgtaccgtccagcctcgagtagccaaa cagctccaggtggatgtggtggtccccgtaccagatctcgccgacctccctgggtccact cgcgtcatcggtgctaccggtaccgcagccactgcgggtgctgcgggtgcttccagggac gtcggtgctgaagcttccgatgctttcagcagtaccggcaccgacagttccggtgcctcc ggaggtgccggtgcgtctgcttcggccggaactgacgcacactccatcgagcccgacctc agcggtgacgcggccgggatggtgcccgagggacgcacccgcccggcaccgtcagggggc tccgcaacggaccgcggatcgatctggccgcatgtgaccgaacgcgtggtggacctcatc acgagccacacctcgacgatcgtgtttacgaactctcgccgcggtgccgagcgcctcgca gcgcggatcaacgagtgctacgccgaacgcctgggcctcggcagcgatctcgatccggga tcggcgtgggccgcagagattcccgctcaatccggcacctcactgcctcggtccccggaa ctgcccgcggaggcgatcatcgcccgaccgcatcacgggtctatgagccgcgacgaacgc acagccacggagacggctctgaagaacgggacgctgccggcggtggtagccaccagctct ctcgaactcgggatcgacatgggcgccgtcgacctggtggttcaggtgggtgcgccaccg tctgtggccagcgccctgcagcggatcggacgagccggacaccatgtcggagccctttcc cacggtgtggtgctccccacccatcgaggtgacctcctcgcggcggccaccaccgcggtc cgcgcgcgggcgggagcgatcgaagcggtgcacgtccccactaaccccttggacgtgctc gcccagcagatcgtggccatgtgtgcgcaggagacctgggacgtccatgaactcgcagcc ttggtgcgccgggcggcgtcattcgacggcctctccgagcgtgtcctgacggcagtgctg gacatgctcgccggccgctaccccagcgaggagtttgcggagttacgcccccgcctggtc tgggaccgggtggccggcacagtgactggacgacccgggacgctccggcttgccgcgacg agcggcggcaccatcccggatcgtggcctctacggggtgtacgtggtgggcgagcaggca tctgcgcgcggtggcaaacgagtgggtgagctcgacgaggagatggtgtacgaatcccgc gtgggcgacacattcaccctcgggtccagcacgtggcgcatcgaggacatcacgcccgat cgcgtgctcgtctcccccgcccccggcttgcccggtcggctgccgttctggaagggagac cgccccggccgccccgccgaactgggccaggcgatcggggcgatgatgcgcgaactcgcc gagagcggactgagtgccgagtccgtggagtcctgggggttggacgactgggccgccgag aatctcctcgcctacctgcgcgaccaagagagagccaccggacgactcagcaccgatcgc acactcgtggtggaacgcttccgggacgagctcggcgactggcgggttgtgatccactcc ccctatggcgccgaggtgcatgccccctgggctctcattctcacggcacgcctgcgtgag cagttcggaatggacgtctcggcgatgcacgccgacgacggcattgtgctgcgattgccg gacactgacgccgcctgggcttggggcggcgacccgtacgggcccgccggtggcggccag cacgccccggcggacggggggcccgagcagccacgcgcagccggcgagctcaccctcgag gatctgctgctcgaccccgatcggatcgaggccgacgcgatggcggcgttgtccggttcg gcgcatttcgctgcacggttccgggaggccgccgcccgctccctcctgctccctccgcgc cgccccgaccggcggcaaccgttgtggcagcaacgtcaacgcagtgcccaactgctggcc gtcgcggcagactacggtgacttccccgtggtgctcgaagcggtgcgcgagtgcctgcag gacgactacgacgtgggcgcgctcattgatctgatgcgaagagtgcgaggacgggacata cacgtggtggaggtgagcacgccgacaccgtccccattcgcccagtcattgctgttcggg tacgtggcgcaattcctctacggcgaggacactccgctcgcggagcgccgggccgcggca ctcaccctcgacgctgacctcctcgccgacctcctcggtgacggtgccgagatcgcggat ctcttggacccggaggctctggcctcggtggaggcagaggtcgggtggcggaccgaatcc tcgctcgcacgcgatccggagagcctgctggaactgatccgcaggctcggacccctcgat gacgagggcctgacgctccgatcgatcgaggccagcgcggtaccggcttggctctccgag ttgcacgagcgccgccggattctgccggtgcgagtctcaggcgaactccgctgggcggtg ctcgaagatgccgggcgcctgcgcgacgccctgggcacagcacttcccaccggacttccc gaggcgctcaccgcaccggtcccgcgagcactggaggacctggttcgacggtatgcacgc gcgcacggaccgtttcgcgccgggcaactcgcgcagtggtacggactcggggtagccacg gtgacacccgtactgaccgagctcgttcggcgcggtgcggtcaccgctggcaccctgcgc ccccaggagactcattcggcagccagcctcgccatgaccggccccgactactgcgacgcc gacgtgctgcgccgcatccgtcgccgctcgctggccgcgctacgcgccgaagtcgaagcg gtacccccggagcgattcggaatctacctgccacgctggcaccaggtccgctcactacgt ggagtggacggtgtcttgaccgctatcgaccaactcgcggggacgccggtggctgcgtcc gcatgggagtccctggtgctccccgcgcgagtgtccgactacaccccggacatgctcgac gaactcaccacatccggtgaggtggtctgggtcggagcgggctccgggccaggcgccgac ggtttcgtcgcgctccttcctgtcgatacggtcgccgacctcgccccggccaccgagcac ccggtgacgacgcccgtgcaccaggccgtcctggatgtgctctcccacggcggtgggctg ttcttccgcgacgtggtagccgcggtgcgcgaggcctggaccgaccgcgagccgacggcc ccggcggtccagatgggtacgccagatacggcagcgccgccaggagccgggcacccacca gtggcttccgaagcaccgggcgccacaatcgaaactgacgccgcgggtccagtgaaccga ccgggcacagcggacccactgagtccagtccgtcgggacggcgcagcgccgtcggcggag gacatcctcacggctctgtgggagtgtgtatgggacggcagggccacgaacgacagcctc gccccacttcgcgctcggctgggcgccaaacctcggcctgggactcgcaccaccagacgc gccaggccccggggtaggtcgttgcgcacgatgcggccggctctcccggtgcccgacaca gccgtggggcgctggtcggcagtggtcgaccgatccgacgccggccgccgcgccacgttc gccgcgctggcgttgctcgaccgagatggattggtcactcgtggcagtgccgcccttgcc gttcctggcgggttcggtactgcgtatcgagccttggccacgctggaggagaacggacag gtgcgccgcggctacttcgtggaaggactcggtgccgcacagttcgcgctcggcgacgcc gtggaacgcctccgcggcgccgggagcgagcccgttgggccccacacccacccagacacc gacaccacactgctcctcgcggcgaccgatccagcgaatccatacggcgcggcactcacc tggcccgaaccggtgggcctggccgaagcgtcctctgcgcatcgcccagggcgaaaagtc ggtgccagcgtggtgctcgtggccggtgtgcccgtgctctatctggaacgcggagcacgg tcagtcctcagtttcacccgggatcgccggccactggatgcggcagccgccgaactcgtg cgcgcggccatggctggcaccctcgggcgcttcacagtggcgaaggtggatggcggcgct gccctcggctcgtcctcaccggccgccgaggcgctgctggcggctggctttctggcgacg ccgagcgggttacgcatccggaggcgttga

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