Ruania halotolerans: LQF10_14065
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Entry
LQF10_14065 CDS
T08257
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhal
Ruania halotolerans
Pathway
rhal03420
Nucleotide excision repair
rhal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LQF10_14065
03430 Mismatch repair
LQF10_14065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhal03400
]
LQF10_14065
Enzymes [BR:
rhal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LQF10_14065
DNA repair and recombination proteins [BR:
rhal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LQF10_14065
MMR (mismatch excision repair)
Other MMR factors
LQF10_14065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
UFU05562
LinkDB
All DBs
Position
complement(3138317..3140353)
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AA seq
678 aa
AA seq
DB search
MSAEQLLDALDPDQRAAAEQLTGPVCVLAGAGTGKTRAVTYRIAHGVHTGVYNPQTVLAV
TFTARAAGEMRTRLRDLGVGGVQARTFHAAALRQLSYFWPSAIGGGVPRIMEHKAPLIGE
AAGRLGLSVDRLAIRDLAAEVEWAKVSMITPDDYVRASAASDRSGVAGFDATTIARLLSV
YEDAKTDRNVIDFEDVLLLTVGILSEREDVADTVRRQYRHFVVDEFQDVSPLQHRLLELW
LGGRDDLCVVGDAAQTIYSFTGATARYLTEFPRRYPEARVVRLVRDYRSTPQVVSLANLV
LARAGRHKSAASVELQAQRPSGPAVRFEAHDDAESEAGAVAARAAELIRSGISASEIAVL
YRTNAQSESYEQALSKAGIGYLVRGGERFFSRKEVRDAIVLLRGAVRAQGEATLPETVRD
VLSSAGWAPEPPAARGAVRERWESLNALVQLADDLYRTREATLADLVAELGERSAAQHAP
TVDGVTLASLHAAKGLEWDAVFLVGASDGLLPISMAETDEAIAEERRLLYVGITRAREHL
QISFARSRNAGGRGTRRPSRFLDGIWPSDEQPTRRRRSKGARAEALASAIAEGDADPEVF
ERLRAWRARTAQELDRPAFTVMHDSTLVAIAAAQPSQMRQLAILRGIGPTKIEAYGAQIL
ATVRGDHAGDGAQPEAAE
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgaacagctcctcgatgccctcgacccggaccagcgcgctgcggccgagcaa
ctcaccggcccggtgtgtgtacttgccggcgccggcaccgggaagacgcgcgcggtgacc
taccggatcgcccacggagtgcacaccggggtatacaacccgcagacggtgctcgccgtc
accttcaccgcacgtgcggcaggtgagatgcgaaccaggctgcgcgatctcggtgtcggc
ggcgtgcaggcacggaccttccacgccgcggcactgcgtcagttgtcgtacttctggccg
agtgcgatcggcgggggcgtgccccggatcatggagcacaaggccccgctgatcggggag
gcggccggccgcctagggctctcggtggaccggctcgccatccgcgatctcgccgccgag
gtggagtgggccaaggtctccatgatcaccccggacgactatgtccgggcctccgccgca
tctgaccgcagcggggtggctggattcgacgccaccacgattgcccgcctgctctcggtg
tatgaggacgccaagacggaccgcaacgtgatcgacttcgaggacgtcctgctgctcacc
gtgggcatcctctccgaacgcgaggacgtggccgatacagtgcgccggcagtaccgccac
ttcgtggtggacgagttccaggacgtctcgcccctccagcatcgcctgcttgagctgtgg
ctcggtggccgggacgatctgtgcgtcgtgggggacgccgctcagaccatctactccttc
accggcgccaccgccaggtatctgaccgagtttcctcgtcgctacccggaggcgagagtg
gtgcgcctggtgcgcgattaccggtccactccccaggtggtctccctggccaacctcgtc
cttgcgcgagccggtcgtcacaagtcggccgcgtcggtggagttgcaggcgcaacgcccg
tccggaccggctgtccggttcgaggcccacgacgacgccgagtccgaggccggtgcggtg
gcggcgcgggcggccgagttgatccgcagtgggatctcggccagcgagatcgccgtgctc
tatcgcacgaacgctcaatcggaatcctacgagcaggcgctgagcaaggccgggatcggc
tatctcgtgcgcggaggcgaacggttcttctctcgtaaggaggtacgggacgcgatcgtg
ctgctccgcggtgcggttcgagcgcagggtgaggccacgctgcccgagaccgtacgcgac
gtgctcagcagcgcaggatgggcgccagagccgcccgccgccagaggtgccgtgcgggaa
cgctgggaatcgctgaacgccctcgtgcagctcgccgatgatctgtatcgcacccgagaa
gccacactggcagacctggtggccgagctgggggagcggtcggccgcccagcacgctccc
actgtcgacggcgtcacgctcgcctcgctgcacgctgccaaaggtctggagtgggacgcg
gtattcctcgtcggagcaagcgacggattgctgcctatttccatggccgagacggacgag
gccatcgcagaagaacggcgcctgctgtatgtgggtatcacccgcgcccgcgaacacctg
cagatctcctttgcccgctcgcgcaacgccggcgggcgcggcactcgccgaccctcccga
tttctcgacggcatctggccctccgacgaacagccgacccgccgtcggcgcagtaagggg
gcacgcgctgaggcgctcgcctcggcaatcgctgagggggatgccgacccggaggtgttc
gaacggctacgcgcctggcgtgcccgcaccgcccaagagctcgatcggcccgcgttcact
gtgatgcatgacagcaccctggtggccatcgcagcagcgcagccctcacagatgcgccaa
ctggccatcctgcggggtatcggccccacgaagatcgaggcctacggggcgcaaatcctg
gcgacagtccggggcgatcatgccggcgacggggcgcagccggaggccgcggagtag
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