Ruania halotolerans: LQF10_14395
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Entry
LQF10_14395 CDS
T08257
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rhal
Ruania halotolerans
Pathway
rhal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LQF10_14395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhal03400
]
LQF10_14395
Enzymes [BR:
rhal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LQF10_14395
DNA repair and recombination proteins [BR:
rhal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LQF10_14395
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
UFU05620
LinkDB
All DBs
Position
complement(3209180..3210013)
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AA seq
277 aa
AA seq
DB search
MSSSSTTFSIATFNVNGIRAAFRRGMGEWLTSAAPDVLLLQEVRATDEILQGFLGEGWHL
AHEESAAKGRAGVAIASRIPFDGVRLGVGDPATRADGEVGRWVEADIMASHADGGAGTPL
TVISTYIHSGTVGTPSMEEKYAFLDKVTARMGELAAQGRAAVVGGDVNIAHTERDIKNWK
GNRKSAGFLPEERAYLDQWTAEHGWVDLGRQFAGDVDGPYTWWSWRGKAFDNDSGWRIDY
QFASPALAGRATEAMVDRAPAYDQRISDHAPLRVTYS
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcttcttccaccacattcagcattgccaccttcaacgtcaacggaatccgggcc
gcgttccggcgcgggatgggtgagtggctcacttccgccgcacccgatgtgctgctcctg
caggaggtccgcgccacggatgagatcctgcagggcttcctcggcgaggggtggcacctc
gcgcatgaggaatcggccgccaaggggcgcgccggggtggccattgcctcccgcatcccg
ttcgacggcgtccggctgggtgtgggagatcccgccacccgggccgatggcgaggtgggt
cgttgggtggaggcggacatcatggcgagccacgccgatggaggagcggggacaccgctg
accgtcatctccacctacatccactccggcacggtggggacgccatcgatggaggagaag
tacgccttcctggacaaggtgaccgcccggatgggtgagttggctgcgcagggcagggcc
gccgtcgtgggcggggacgtgaacatcgcgcataccgagcgcgacatcaagaactggaag
ggcaaccgcaagagcgccgggttcttgcccgaggagcgcgcctatctggaccaatggacc
gccgagcacggctgggtggacctggggcggcagttcgccggagacgtggacgggccgtac
acctggtggtcctggcgcgggaaggccttcgacaacgactccgggtggcggatcgactac
cagttcgccagcccggccttggccgggcgcgctactgaggcgatggtggatcgggcgccg
gcgtatgaccagcgcatctccgatcacgcgccgttgcgcgtgacgtactcctga
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