Ruania halotolerans: LQF10_14510
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Entry
LQF10_14510 CDS
T08257
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhal
Ruania halotolerans
Pathway
rhal03420
Nucleotide excision repair
rhal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LQF10_14510 (pcrA)
03430 Mismatch repair
LQF10_14510 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhal03400
]
LQF10_14510 (pcrA)
Enzymes [BR:
rhal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LQF10_14510 (pcrA)
DNA repair and recombination proteins [BR:
rhal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LQF10_14510 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
LQF10_14510 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
Viral_helicase1
CarD_TRCF_RID
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
UFU05643
LinkDB
All DBs
Position
complement(3235333..3237837)
Genome browser
AA seq
834 aa
AA seq
DB search
MTSLFDDLPLFPSATVPEGSDSHLPSMPRRDRDDDAGQVSDDGGQARGGSEGPPSLAAEA
LLDGLNPQQKAAVEHSGGQLLIIAGAGSGKTRVLTHRIAYLLATGRARSGQILAITFTNK
AAAEMRERVAELVGPRAATMWVSTFHSACVRILRREAKTLGIRSSFSIYDAADSQRLMTL
VCRELDLDPKRFPPKAFSRRVSDLKNELIDPDDYAATAGESNPFEQNLAAAYRLYNERLR
QAHALDFDDIIMSTVNLLQAFPAVAEHYRRRFRHILVDEYQDTNHAQYVLVRELTGATGG
ADGPDGAGSVAEEGAPAALPPAELTVVGDSDQSIYAFRGATIRNILEFEGDYPNARTIVL
EQNYRSTQTILSAANSVIAKNPERRAKNLWTDSGAGAQIIGYVADNEHEEARFIAEEIDG
LIDAGEISPRDVAVFYRTNAQSRALEEVLIRVGLPYKVVGGTRFYERKEIKDAIAYLRSI
ANPDDSVNLRRILNVPKRGLGDRAEAMLAAHAERERVSFGAAIEDLDNVLGLATRSMTAV
RGFAQMMRELRALADGGAPPAEVLDAALDRSGYLAELRASSDPQDHSRVENLAELHAVAA
EFSESDPEGDLGDFLERVSLVADADQIPDDDQGMVTLMTVHTAKGLEFPMVFVTGLEDGT
FPHQRSLADPSELAEERRLAYVALTRARQRLYLTRAAVRTSFGLPNEFPASRFLSDVPEE
LLDWKRAESSMSALRAGGSGWGGGRAGQGRGGSRGPSAPVQTTTRGERPASFGSATPRGE
VPTLDIGDRVTHDAYGMGRVVALEGTGSNTVAKIDFGDSGVKRLLLRYSPVEKL
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgacatcactgttcgacgatcttccgctgttcccgagtgcgaccgtgcccgagggcagt
gactcgcacctgccttcgatgccacgtcgcgaccgcgacgatgacgcgggccaggtgagc
gacgatggaggccaggcccgcggcgggagcgaggggccgccgtcgttggccgccgaagcg
ctcctggatgggctgaacccgcagcagaaggcggctgtggagcactcgggcgggcaactg
ctgatcattgccggtgccggttcgggcaagacccgggtgctgacccaccggatcgcgtac
ctgctggccaccggtcgagcgcgctcggggcagatcctcgcgatcaccttcaccaacaag
gccgcagcggagatgcgcgagcgcgtcgcggagctagtggggccgcgtgccgccacgatg
tgggtctccaccttccactccgcctgcgtgcggatccttcggcgcgaggcgaagaccctc
gggatccgatcctcgttctccatctacgatgccgccgactcccagcggctgatgacgctg
gtgtgccgggaactggacctcgaccccaagcgattcccgccgaaggcgttcagccgccgg
gtgtccgacttgaagaatgagctcatcgacccggacgactatgccgccaccgcgggggag
tcgaacccgttcgagcagaaccttgccgccgcgtaccgtctctacaatgagcggctccgg
caggctcatgccctcgatttcgacgacatcatcatgtccacggtgaacctgctgcaggca
ttccccgcagtggccgagcattaccggcgccggttccgccacatcctcgtggacgagtac
caggacaccaaccacgcccagtacgtgctcgtgcgcgagctcaccggtgccaccggtggt
gctgacggccccgacggcgcaggttcggttgccgaggaaggtgcgccggccgcgctcccg
cccgccgagctgaccgtggtgggtgattcggatcagtcgatctacgccttccgcggcgcc
accatccgcaacatcctcgagttcgagggtgactatcccaacgcgcgcaccatcgtgctg
gagcagaactaccggtccacacagacgatcctgtccgcggccaactccgtgatcgccaag
aacccggagcggcgcgccaagaacctatggaccgactccggcgccggcgcccagatcatc
ggctacgtggccgacaacgaacacgaagaggcccggttcattgccgaggagatcgacggg
ctcatcgatgccggtgagatcagcccgcgcgacgtggccgtgttctaccggaccaatgcc
cagtcccgtgccctcgaagaagtgctgatccgcgtgggactgccctacaaggtagtgggc
ggcacccggttctacgagcgtaaggagatcaaggacgcgatcgcctacctgcgctcgatc
gccaacccggacgattcggtgaacctgcgccgcatcctgaatgtgcccaagcgtggcctc
ggagaccgcgccgaggcgatgcttgccgcacacgccgaacgcgaacgcgtctccttcgga
gccgcgatcgaggatttggacaacgtgctcgggcttgcgacgaggtccatgacggcggtg
cgtgggttcgctcagatgatgcgtgagttgcgggcgctcgcggacggcggggcacctccg
gccgaggtgctcgacgcggccctcgatcggtccggctatctggcagagctgcgggcgagt
agcgatccacaggaccactcccgggtggagaacctcgccgagctgcacgcggtggccgct
gaattctctgagtctgatcctgagggcgacctgggtgacttccttgagcgggtctccctg
gtggccgatgccgatcagatccccgatgacgatcagggcatggtcaccctgatgaccgtg
cacaccgccaaagggctcgagttcccgatggtgttcgtcaccggacttgaggacggcaca
ttcccgcaccagcgctctctcgccgacccgagtgaactcgccgaggagcgacggctcgcc
tacgtcgcgctgaccagggcgaggcagcgcctctatctcacccgggccgccgtccggacg
tccttcggcctcccgaacgagttccccgcgagccggtttctctccgatgtgcccgaggag
ctgctcgactggaagcgggccgagtcctcgatgtccgccctgcgagcggggggcagcggt
tggggtggtggacgtgccgggcaggggcgtggcggctcgcgcggaccgtcggctccggtg
cagaccaccacgcggggcgagcggccggcgagcttcggctcggccactccgcgtggggag
gtgcccacgctcgacatcggcgaccgggtcacccacgacgcctacggcatgggacgagtg
gtggcgctggaaggtaccgggtcgaacaccgtcgcaaagatcgacttcggtgacagtggg
gtcaagcgtctgctgctgaggtactcgccggtggagaagctgtga
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