Ruania halotolerans: LQF10_15010
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Entry
LQF10_15010 CDS
T08257
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rhal
Ruania halotolerans
Pathway
rhal03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rhal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LQF10_15010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhal03021
]
LQF10_15010
03400 DNA repair and recombination proteins [BR:
rhal03400
]
LQF10_15010
Enzymes [BR:
rhal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LQF10_15010
Transcription machinery [BR:
rhal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LQF10_15010
DNA repair and recombination proteins [BR:
rhal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LQF10_15010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
UFU05733
LinkDB
All DBs
Position
complement(3351269..3352273)
Genome browser
AA seq
334 aa
AA seq
DB search
MLIAQRPTLTEDVVDEYRSRFIIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFSTITGVKEDVTEIILNIKNIVVSSENDEPVVMYLRKQGPGTVTAADITPPAGVEVHN
PDLHIATINAKGKLEVELTVERGRGYVSAAQNKSFDAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKRSIDPRDALASAGKTLVELFGLARELNVEAEGIEIGPSPTD
SALAEDLALPIEQLDLTIRSYNCLKREGIHTVGELVARSEADLLDIRNFGAKSITEVKEK
LVGLGLSLKDSPADFDPTLVASAYDDGDDFDAYN
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
gtgctcatcgcacagcgccccacgctcaccgaagatgttgttgacgagtaccgctctcgc
ttcatcatcgagccccttgagcccggtttcggctacacactgggcaactcgctccggcgg
accctgctctcctcgattcccggcgccgccgtgaccagcatccgtatcgacggcgtgctg
cacgagttctccaccatcaccggggtcaaggaggatgtcaccgagatcattctcaacatc
aagaacatcgtcgtttcctcggagaacgatgaacccgtcgtgatgtacctgcgcaagcag
gggcccggcacggtgaccgccgcggacatcaccccgcctgccggggtggaggtgcacaac
ccggatctgcacatcgcgacgatcaacgccaagggcaagctcgaggtcgagctgaccgtg
gagcgcggccgaggctacgtgtcggcggcgcagaacaagtccttcgatgcggagatcggc
cggatcccggtggactcgatctactccccggtactgaaggtgacctacaaggtcgaggcc
acacgtgttgagcagcgcactgacttcgacaagctgatcgtcgatgtcgagaccaagcgt
tccatcgacccgcgcgatgcgctcgcctcagcgggaaagaccttggtcgaactgttcggc
ctggcgcgtgagctgaacgtcgaggccgagggtatcgagatcggcccgtcgccgacggac
tcggcgcttgccgaggatctggcactaccgatcgagcagttggacctgaccatccggtcc
tacaactgcctgaagcgcgagggaatccacaccgtgggcgagctcgtcgcgcgcagtgag
gcggacctgctcgacatccgtaacttcggtgcgaagtcgatcaccgaggtgaaggagaag
ctggtgggcctgggcctgtccttgaaggacagtcctgccgacttcgacccgaccctcgtg
gccagcgcttacgacgacggcgacgacttcgacgcctacaactaa
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