Ruania halotolerans: LQF10_16780
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Entry
LQF10_16780 CDS
T08257
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rhal
Ruania halotolerans
Pathway
rhal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LQF10_16780 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhal03400
]
LQF10_16780 (xth)
Enzymes [BR:
rhal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LQF10_16780 (xth)
DNA repair and recombination proteins [BR:
rhal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LQF10_16780 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
UFU06060
LinkDB
All DBs
Position
3708400..3709176
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AA seq
258 aa
AA seq
DB search
MRIASWNVNSIRARAERVTAWLERNDVDVLLVQETKTKDETFPYLPFQAAGYEVAHHGLN
QWNGVAICSRVGLTDVAHSFPGQPGWGEGDAMEARAIGATCAGLRLWSVYVPNGRTLEDP
HYTYKLRWLDALREAAAGWAESGAPVGLLGDWNVAPRDEDVWDIAVFEGSTHVSAAERAA
FDAFADAGYREVTREHLPQVYTYWDYQRLRFPKNEGMRIDFAWATAALADRVRAVAVDRE
ERKGKGASDHVPVVLDVE
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
gtgcgaatcgcgagctggaatgtgaactcgatccgagcccgggcggagcgggtgaccgct
tggctcgagcgcaacgatgttgatgtgctgctggtccaggagaccaagaccaaggacgag
acgttcccgtatctcccgttccaggcggccggctacgaggtggcgcaccacggcctgaac
cagtggaacggcgtcgccatctgctcacgggtggggctgacggatgtggcgcactccttc
cccggccagcccggctggggtgagggggatgcgatggaagccagggcgatcggtgccacc
tgcgcgggcctgcgactgtggagcgtctacgtcccgaacggccgcaccctggaggacccg
cactacacctacaagctgcgttggctggacgctctccgggaggccgctgccggatgggcc
gagtccggtgctcccgtgggcctgctcggcgattggaatgtggcaccgcgtgatgaggac
gtgtgggacatcgccgtgttcgaggggtccacgcacgtctctgcggccgaacgtgcggcg
ttcgacgccttcgccgatgccggctaccgggaggtgacgcgggaacacctcccgcaggtc
tacacctattgggactatcaacggctgcgcttcccgaagaacgaagggatgcggatcgac
ttcgcctgggccaccgctgccctggccgatcgcgtgcgcgctgtggcggtcgatcgcgag
gaacggaagggcaagggtgcctcggaccatgttcccgtggtgcttgacgtcgagtag
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