Ruania halotolerans: LQF10_17605
Help
Entry
LQF10_17605 CDS
T08257
Name
(GenBank) DEAD/DEAH box helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rhal
Ruania halotolerans
Pathway
rhal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LQF10_17605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhal03019
]
LQF10_17605
03400 DNA repair and recombination proteins [BR:
rhal03400
]
LQF10_17605
Enzymes [BR:
rhal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LQF10_17605
Messenger RNA biogenesis [BR:
rhal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LQF10_17605
DNA repair and recombination proteins [BR:
rhal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LQF10_17605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_16
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
UFU06217
LinkDB
All DBs
Position
3888191..3890278
Genome browser
AA seq
695 aa
AA seq
DB search
MTSTAEFLATTIRSVAGPDAAPRPDQERAVVELVDHGRRVLVVQATGWGKSAVYWGATAA
LRSRGAGPTLVVSPLLALMRDQIAAAERAGLAAATINSTNIEEWDDVLAALAAGRIDVLL
VSPERLANPRFAERLPELLASTGMLVIDEAHCVSDWGFDFRPDYQRLTRTLLHLAPGTPV
LATTATANERVTADVAAQLGTDDTEALTLRGSLARASLRLAVVPGLSPLERYAWVAQALA
ELPGSGIVYALTVAEAERVAGFLREQGLDVAAYTGQTENRTELEDKLRDNQVKALVATSA
LGMGYDKPDLAFCIHLGSPASPVAYYQQVGRAGRALDNATAVLVPSDADERIWEYFATAG
IPDPEQVDQVLDVLGRAAAGDPEAGAPAEVVSETALSTATGIRPGRLSTLLKIIAVDGVV
ERVRGGWVGTGRPWHYDEQKWAGLRKVRAAEADLMRRYAHGEGCLMQFLQQALDDPDPQP
CGRCSVCDGHLPAPGHHPGEAMVAVARTYFRGLDAVVEPRKLWPSGVDGVRGKIGPVIAP
GRAVAFADDPAWSDVLARMWQRDEPAPAEILEAAVATLKRWSPHWQRPTAVVAMPSRRFP
QLVGSVAAHLSQVGRLPLVEALEVTGPRPTEEATSGMRVRELLARTRVVEGVELSGPVLL
VDDAIRTRWTVTVAAHLLGSAGASTVLPFAVHQLP
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccactgccgagtttctcgccaccaccatccgctccgtggccgggcccgacgcc
gccccgcgccctgatcaggaacgtgcggtggtcgagctggtcgatcacggccggcgggtg
ctggtggtgcaggccaccggatggggcaagtccgctgtgtattggggggcgacggcggcc
ctgcgctcccgtggggccggccccactctcgtggtctcgcctctcctggcgctgatgcgg
gaccagatcgcggccgcggagcgggcggggctggcagccgccacgatcaactccacgaac
atcgaggagtgggacgacgtgctggcagcgcttgccgcaggccggatcgatgtattgctc
gtctcccccgagcggctcgcgaacccccggttcgccgagcgcctcccggagttgctcgcc
tccaccgggatgctggtgatcgacgaagcgcactgcgtctctgactggggcttcgacttc
cgcccggactaccagcggctgacccgcactctgctccatctggcgcccggcacaccggtg
ctggccaccacggcgacggcgaatgagcgggtgacggccgacgtcgccgcccaactcggt
actgacgacactgaggcgctgactcttcgcggctcccttgcgcgtgcctccctccggttg
gccgtggtgccagggctgagcccgttggagcggtacgcgtgggttgcgcaagcattggcc
gagctgccggggtccgggatcgtgtacgccctcaccgtggccgaggcggagcgggtggca
ggcttcctgcgcgaacaagggctggacgtggccgcctataccgggcagaccgagaatcgc
accgagcttgaggacaagctgcgcgacaaccaggtgaaggcgctggtggcaacctcggcg
ctggggatgggctacgacaagcctgatctggcgttttgcatccacctcggttcccccgcc
tctccggtggcgtactaccaacaggtggggcgcgcggggcgcgcattggacaacgcgacg
gcggtactggtgccctccgatgcggatgaacgcatctgggagtacttcgccacggcgggg
attcccgatccggaacaggtggatcaggtgctcgacgtcctcggccgcgctgcggcggga
gacccggaagcgggcgcaccagccgaggttgtctcggagacggcgctgtccacggccacg
gggatcaggcccgggcggctgtccacattgctgaagatcattgccgttgatggtgtggtc
gagcgggttcgtggtggctgggtgggcacgggacgcccgtggcactatgacgaacagaag
tgggccgggctgcgcaaggtccgagcggcggaagccgacctcatgcgccggtacgcccac
ggcgagggctgcctgatgcagttcctgcagcaggcactggacgatccggacccgcagccg
tgcgggcggtgttcggtatgcgacgggcacctgcccgcccccggccaccatccgggcgag
gcgatggtggccgtggcgcggacctatttccgtggccttgacgccgtggtggagccgcgc
aagctgtggccctccggcgtggacggggtgcgcgggaagatcggcccggtcatcgccccg
ggccgggcggtcgcgttcgccgacgatcccgcgtggtcggacgtactggcgcgcatgtgg
cagcgggacgaacccgcaccggcggagatcctcgaggccgccgtcgccacactgaaacgg
tggtcaccgcactggcagcgcccgacggcggtggttgcgatgccatcgagacgctttcct
cagttggtgggttccgtggccgcgcacctgtcgcaggtgggccgcctcccgctcgttgag
gcactggaggtgaccgggcctcgccctacggaggaggccacctcagggatgcgagtgcgc
gaactgctcgcccgcacgcgcgtggtcgagggagtcgaactgtccggtccggtgctgctg
gtggatgacgcaatccggacccgatggacggtcaccgtggccgcacacttgctgggcagc
gccggggcgtcgaccgtgctcccgttcgcagtgcatcagttgccgtaa
DBGET
integrated database retrieval system
