Ruania halotolerans: LQF10_18020
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Entry
LQF10_18020 CDS
T08257
Name
(GenBank) glycoside hydrolase family 78 protein
KO
K05989
alpha-L-rhamnosidase [EC:
3.2.1.40
]
Organism
rhal
Ruania halotolerans
Pathway
rhal00946
Degradation of flavonoids
rhal01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhal00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00946 Degradation of flavonoids
LQF10_18020
Enzymes [BR:
rhal01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.40 alpha-L-rhamnosidase
LQF10_18020
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_rhamnosid6H
Bac_rhamnosid_N
Bac_rhamnosid
Bac_rhamnosid_C
Motif
Other DBs
NCBI-ProteinID:
UFU06297
LinkDB
All DBs
Position
complement(3983020..3985713)
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AA seq
897 aa
AA seq
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MSVIADAPTIEHHREPLGIGEASPRVSWRVSSAPPGWQQTGYRLLVVRGGVGDAGQAGKP
GRDAGAAKFGQNRPGAAAEAGGGAAVGTDHAVAVHSAEQILVPWPLEPLASREAATVRVQ
VCGADGQWSEPSEPTRLETGLLSPEDWQARPVGARWLEQRDSDSRRPSLVRREFTLGEGV
ASARLYASAHGLYEAEINGTRVGTDTLSPGWTSYGTRLRYYTYDVTELLHPGANAVGAWL
ADGWYRGRIGWYEGFRNVFGEDLSFIGQLEVTYTDGRVETIATDRTWRTAPSPIVRSGIY
DGEDHDARLEQPGWSVPGFDDDAWEQVAVRYRDPATLVAPTAPPVRCTQEVHPVAVLTSP
AGHRILDFGQNLAGRVRIRVQGPAGATVRLRTAEVLQEGELYTRPLRSARSTDHYTLAGR
EIEQWEPRFTFHGFRYVEVDGWPGDLDADVADGALVARVLHTDAERTGWFDCSDELVSQL
HENIVWGMRSNFVDVPTDCPQRDERAGWTGDIQVFGPTASFLYDVSGMLAGWLRDVEADQ
LPDGTVPWYVPVIPAHRMWTPIRPGAAWGDVATMLPWTLYQRFGDAGVLETQYGSARRWV
DLVDRLAGDDHLWDEGFQLGDWLDPAAPPDDPADARTDRYLVASAYFARSSRLMAQTADR
LGATEDAARYGRLADAVAEAFRATYVLPDGRMTSDAVTAYALGLEFDLLTPEQREVAGRR
LAELVREAGHRIATGFVGTPLVTDALTSASELETAYGLLQERECPSWLYQVEQGATTVWE
RWDSMLPDGTVNPGKMTSFNHYALGAVADWMHRVVAGLAPAEPGYRRIRFAPRPGGGLTH
ASARHLTPYGEAAISWRIARGELVVDVTVPVGAEAILELPDSEPEILGHGQHRRMRT
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcatcgctgacgcccccacgatcgaacatcaccgcgagccgctgggcatcggc
gaggcgagcccgcgggtctcctggcgggtcagttccgcgccgcctgggtggcagcagacc
ggctaccggctgctggtggtgcgcggtggcgtcggtgacgccggtcaggcaggcaagcct
ggacgggatgctggagccgccaagtttggacagaaccgtccgggcgcagcggcggaggct
ggagggggtgcggcggtcggtaccgaccacgccgtggcggtccactcggccgagcagatc
ctcgtgccgtggccgctcgaaccactggcctcgcgcgaagccgccaccgtgcgcgtacag
gtctgcggtgcggacggtcagtggtccgagccctccgaaccgacccggctcgaaaccgga
ctgctcagtcccgaggactggcaggcccggcccgtcggcgcccgatggctggaacagcgc
gactccgactcccggcgcccctccctcgtccgccgggagttcacactcggcgagggtgtg
gcgagcgcgcgcctgtacgccagcgcccacgggctctacgaggccgagatcaacggcacc
cgcgtgggcacggacactctctcgcccggatggacctcctacggcacccggctgcggtac
tacacctacgacgtcaccgagctgttgcacccgggggccaacgccgtcggggcctggctc
gcggacggctggtaccgggggcggatcggctggtacgagggattccgcaacgttttcggt
gaagatctgtccttcatcggccagctcgaggtgacctacaccgacgggcgcgtcgagacg
atcgccaccgaccgcacctggcgcacggcgccgagtccgatcgtgcgttcggggatctac
gacggcgaggatcacgacgcccggctcgagcagccggggtggtcggtccccgggttcgac
gacgacgcgtgggagcaggtggccgtgcgctaccgcgaccccgcaacgctggtggccccg
acggcgcccccggtgcggtgcacccaggaggtgcaccccgtggcggtgctcacctccccg
gccggccaccgcatcctcgacttcgggcagaacctcgccggccgcgtgcggatccgggtg
caggggccggcgggtgcgacggtgcggctgcgcacggccgaggtgctgcaggagggcgag
ctctatacccgcccgctgcgctcggcgcggtccaccgaccactacactctcgccgggcgc
gagatcgagcagtgggagccgcggttcaccttccacggcttccgctacgtcgaggtggat
ggctggccgggtgatctcgatgccgatgtggccgacggcgcgctggtggcccgggtgctg
cacaccgacgccgaacgcaccggctggttcgactgctccgatgaactcgtgagccagctg
cacgagaacatcgtctgggggatgcgttcgaacttcgtggacgtgccgaccgactgcccg
cagcgcgatgagcgcgccgggtggaccggggacatccaggtgttcggacccacggcgtca
ttcctgtacgacgtctccgggatgctcgccggctggctgcgcgacgtcgaggccgaccag
ctccccgacggcactgtgccctggtacgtgccggtgatcccggcgcaccggatgtggacg
ccgatccgccccggcgccgcgtggggggatgtggcgaccatgctgccgtggaccttgtat
cagcgcttcggcgatgccggggtgctcgagacccagtacggcagcgcccgccgctgggtg
gacctggtagaccggttggccggggacgatcacctgtgggatgagggcttccagctcggc
gactggctcgacccggccgccccgccggacgacccagccgacgcacgcaccgaccggtac
ctggtggccagcgcgtacttcgcgcggtcctcccggctgatggctcagaccgccgatcgg
ctaggtgctacggaggatgcggcgcgctacgggaggctcgcggacgccgtcgccgaggcc
ttccgggccacctacgtgctgccggacgggcggatgaccagcgacgccgtcaccgcctat
gccctggggctcgagttcgacctgctcacgcctgagcagcgggaggtcgccggacggcgg
ctggccgaactggtccgcgaggctgggcaccggatcgcgaccggcttcgtgggcacgccg
ctggtgaccgatgcgttgacgtcggccagtgagctggagacggcgtacgggctgctgcag
gagcgggagtgcccgagctggctgtaccaggtggaacagggcgcgacgacggtgtgggag
cggtgggactcgatgttgcctgacggcaccgtcaacccggggaagatgacctcgttcaac
cactacgccctcggcgccgtggccgactggatgcaccgggtagtggcggggctcgctccg
gcagaaccgggctatcgccggatccggttcgctccgcgccccggcggtgggctcacgcac
gcctcggcgcggcacctcaccccatacggcgaggccgcgatctcctggcggatcgcccgg
ggcgaactcgtggtcgatgtgacggtacccgtgggcgccgaggcgattctggagctgccg
gactcggagccggagatactcgggcacgggcagcatcgccggatgcggacctga
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