Ruania halotolerans: LQF10_18890
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Entry
LQF10_18890 CDS
T08257
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K16013
ATP-binding cassette, subfamily C, bacterial CydD
Organism
rhal
Ruania halotolerans
Pathway
rhal02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rhal00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LQF10_18890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhal02000
]
LQF10_18890
Transporters [BR:
rhal02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LQF10_18890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
RsgA_GTPase
AAA_16
AAA_22
ABC_ATPase
AAA_25
AAA_21
AAA_29
AAA_24
GTP_EFTU
TsaE
AAA_18
Motif
Other DBs
NCBI-ProteinID:
UFU06461
LinkDB
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Position
4170347..4172116
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AA seq
589 aa
AA seq
DB search
MMIDANIAPYARQAWPRLAGTAAITLLASGASIGAAFAMAAAFTHILTTGGTLPIGALTA
AVALLLLRALLLWSRDLSALHTGTVIARTIRERLLRHIVALGPGHRWPGGRASAHLAAVD
GCEHLKGYLGNYLPQALAAVLVPATLTIVLFVRDPAVAVVVIIAVATVPLAHRITKRLLG
ERAAAHWQAYDRYAARVSDNIAGIATLAGFGAAERRGDRLARDAETLRAATTANMNVSLS
TYVLTSAAMLLGTSGATLLAAWHAAEGRLSPGDVLLVLFLAAECFRPLQDLQNYWHEGFY
GLAAAGSINRILATEPQVTSAPDAVPVDLAGPPGLRLREVSFTYPGTDRPSLEKVTATIP
AGRTTALVGASGAGKTTLTALLLRDADPDNGSVELTTETGSHDLRRIPLDQVRQISARVS
QDVVLMEGTVEENVRLAAPESATEGQVHAALDTAQVTPFLAELPAGPQSNVGEGGTNLSG
GQRQRVALARALVQGAPLLVLDEATSALDGENEALISAAVRSSDRSRTTVVIAHRLSTVA
QADHVIVLGEGRVLEEGSPAELETRPEGAWTAMVRAQRIADGGPREVVS
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcgacgcgaacatcgcgccctatgcccgccaggcgtggccacgactggccggt
acggcagcgatcacgctgctcgcctccggcgcctcgatcggcgctgccttcgcgatggcc
gccgccttcacgcacatcctcaccaccggtggcacgctccccatcggagccctgacggcg
gccgtcgccttactcctgctccgcgctttgctgctctggtcacgggacctctccgccctg
cacaccggcacggtgatcgcgcgtacgatccgggagcgcctactccgccacatcgtggcg
ctcggccccgggcaccggtggccgggtgggcgggcgagtgcgcacctggcggcggtggat
ggctgcgagcacctcaagggctacctgggcaactatctcccccaggccctggccgccgtg
ctggtgcccgccacgttgaccatcgtgctgttcgtgcgcgatccggccgtcgcggtcgtg
gtgatcatcgcggtggcaaccgtcccgctggcgcaccggatcaccaagcggttactcggc
gaacgcgctgcggcgcactggcaggcctatgaccggtacgcggctcgggtgagcgacaac
atcgccgggatcgccacgttggccggattcggcgcagccgagcggcgcggggatcgcctc
gcccgtgatgccgagaccctccgggccgccaccacggcgaatatgaacgtctccctctcc
acctatgtgctcacctccgcggccatgctgctcggcacgtcaggcgccactctgctcgcc
gcctggcacgccgccgaagggcgcctctccccgggagacgtgctgctcgtgctcttcctg
gcggcggagtgcttccggccgctgcaggatctgcagaactactggcatgaggggttctac
ggactggcggcagcgggttcgatcaaccgcatcctggccaccgagccacaggtgacgtcg
gctcccgatgcggtgccggtcgacctcgccggccctcccgggctacgactgcgggaggtg
agcttcacctatcccgggaccgatcggccgagtctggaaaaggtcacggcgacgatcccg
gcggggcggaccacggcgctggtaggcgccagcggggccgggaagaccactctcacggcg
ctcctgctccgcgatgcggatccggacaacgggtccgtggagctcactaccgagaccggt
agccacgacctgcggcggatcccgctggatcaggtccgccagatcagcgcccgggtgagc
caggacgtggtgctgatggagggaacagtggaggagaacgtgcggctggcagcccccgaa
tcggccacggaaggtcaggtccacgcggccctggacacagctcaggtgacgccattcctg
gcggagttgcccgccggcccgcagagcaacgtcggcgagggcgggacgaatctctccggt
ggtcagcgccagcgggtggctttggcgcgcgcactcgtgcagggggcgccgttgctcgtc
ctcgacgaggccaccagcgccctggacggggagaacgaggcactgatcagtgccgcggtc
cgctcgtcagatcgttcgcggaccacggtggtgatcgcccatcggctctccacggtggcc
caggccgatcacgtgatcgtgctcggtgaggggcgggtgctcgaagagggcagccccgcc
gaactcgagacccgcccggagggggcgtggaccgccatggtgcgcgcacaacgtatcgcc
gacggcggccctcgcgaggtggtctcatga
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