Candidatus Rhabdochlamydia oedothoracis: RHABOEDO_000050
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Entry
RHABOEDO_000050 CDS
T07398
Name
(GenBank) Passenger-associated-transport-repeat
Organism
rhaw
Candidatus Rhabdochlamydia oedothoracis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PATR
Motif
Other DBs
NCBI-ProteinID:
QYF47977
UniProt:
A0ABX8V0D7
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All DBs
Position
57372..60311
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AA seq
979 aa
AA seq
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MDSKHFLILTSIIFFSAPLWGDTYTVSSEADAGPGSLRQAILDLNETGNTATNTITINSG
LPPILLTSKLPVIQRTAKITTSGTVPQIIDGNQNRLFVANANLTIENCNIQNGAAIGGNG
ISNRSSGGGGGLGAGGGVYVAPNTVVTLNNTSLKNNLAQGGKGAGGFQNLKGGGFSGSGG
GASFSSADPNASPTQGGGDNPGQHGANGNPLAGGGNGGGNGGRVTAEVLYNGIPYKIFYL
GSKFPVNKIGPAFQVGKAIYDLFFKDPLEPKFEITNGDLGSSSRDLSNGGGGKGGSTTGS
IYEFLTSDQVVDGGTGGKGGAGGGGGGGAYVAQPPTLFQQKANVLFGEKIVYVKIQLVSQ
PGNGGDKGGGGGAASVLRNGGGGGGYGSGGGGGSSSVIDLSTPQKGRGEVPGPISRTPNQ
AIAQLVPITGFGSGGGGGGFGGGGGGGGGDLTTLPGATVKYTTGGGGGFKALRLNPIVIS
VGRNIPFQGGGGGGGGGFGGGGGGNDAFLQETPSENNEKYYHVFKAGEVSQGGSFGGNGG
GQAQQIKPYAGSGGGGAGIGGAVFVGNNAQLVIQDSVSLRGNQTQGGEAGTDSVGSDIAL
PAGPGLGFADDIFLYSDAKLVFQNENSLLADFSIQSDPGSFQDIGVRKEGSGTVTMTSQK
NNYRGPTVIKEGTIVIASDVLGFRSSELVFAGGTLEATDTFSLERDIILNLEGTIAVNPS
RTLFIGGPIRGEGSLTKTDAGTLVLTETVPMGNLIIKDGTVQGNASYIQNDVLINSFGTL
IFDQNFSGAYEGQISGNGTLVKDGTERLSFIGVDDFAGNTIIQNGTLVIPVKEKFASNSV
NVMRGTLQNNGTINAGVVTNYGYIFGSGTFNISIMKNFGFVEPGNSIGTLTINGNYTQDP
SGRLGIEIDVIGGSDLLEVTGMASLNGELLIKPTPGVYLEGTTYTFLTAESVTGQFSRTV
ISRPFDYTINYLPNQVQLF
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggattctaagcactttcttatcttaactagcataatttttttttcagctcctttgtgg
ggcgatacctatacagtttcaagtgaagccgatgcaggcccaggcagccttagacaagct
attttagatctgaatgagacagggaatacagctactaatactataactataaatagcgga
ttgcctcctattctgcttactagcaaattacctgttatccaaagaacggcaaagattact
acgtctggaacagttcctcaaataattgatgggaaccaaaatcgtttattcgttgcaaat
gctaatctaactatcgaaaattgcaatatacaaaatggtgcagctattgggggaaatgga
atctcaaatcgaagtagtggaggaggaggaggattaggagcagggggtggagtgtatgta
gctcctaatactgttgttactttgaataacacctctcttaagaataatcttgcacaagga
ggaaaaggtgcaggtggttttcaaaatttgaaaggaggaggtttcagtggatcaggagga
ggtgctagtttttcatcagctgacccaaatgctagtccgacacaaggaggaggggataat
ccaggtcaacatggagcgaacggaaacccattagcaggaggaggaaatggaggaggaaat
ggaggaagggtaacagctgaggttttgtacaacggcatcccttataaaatattttaccta
ggttctaaattcccagtcaataaaattggtcctgcttttcaagttggtaaagccatttat
gaccttttttttaaggatcctttagaacccaaattcgagataacaaatggtgatttaggt
agtagttctagagacttaagcaatggtggtggtggaaaaggtggctctactacaggtagt
atttatgagtttttgacaagtgatcaagttgtagatggaggaacgggaggaaaaggagga
gccggtggaggcgggggtggaggtgcgtatgttgcacaacctccaacactatttcagcaa
aaagcaaatgtcctattcggggaaaaaatagtctatgtaaaaatacaacttgtatctcaa
cctggtaatggtggtgataagggcggtggcggtggtgctgcaagtgtcctaagaaacggt
ggtggtggtggtggttatggcagcggtggtggtgggggatcctcatctgtgattgacctt
tcaactccacaaaaaggacggggagaggttccaggccccatttccagaactcctaatcag
gcaatagcacaactagtacctataacgggttttggtagtggtggtggtggtggtgggttt
ggcggtggtggcggtggtggtggtggagatttaacgaccctcccaggagcaacagtcaaa
tatacaacgggaggaggaggaggattcaaagctcttaggcttaacccgatagtaatttct
gttgggagaaacattcctttccagggaggagggggaggaggcggaggtggttttggaggc
ggcggaggtggcaacgatgcttttcttcaggaaacgccttctgaaaacaacgaaaagtat
tatcatgtttttaaggctggtgaggtcagccaaggagggagctttgggggaaatggcggt
ggtcaggctcaacaaataaaaccttatgcaggaagtggtggtggtggagctggaattgga
ggagctgtttttgttggtaacaacgcgcagttagttatccaagactcggtttctttacgt
gggaatcaaacccaaggaggcgaggctggaacagattctgtcggatctgatattgctcta
cccgctgggcctgggcttggatttgctgacgatatttttttatatagtgacgctaagtta
gtatttcaaaatgagaactctttactagcagattttagtatccaatcagatccaggaagt
tttcaagatataggggttagaaaagaaggtagtggcacggttactatgacctcacaaaaa
aacaactatcgaggacctactgtaatcaaagagggaactattgttatagcaagtgatgtg
ctgggatttcgttcttcagagctcgtttttgcaggaggaacccttgaagcaacggatact
ttttccttagaaagggatattattttaaatttagagggaactattgctgtaaatccttct
cgtactttatttattggaggccctatccggggtgagggttctctcacaaaaacagacgcg
gggaccttggttttaacagaaacagttcctatgggaaatttgatcataaaagacggaact
gtgcaaggaaacgcatcttatatacaaaacgatgttcttattaacagcttcggaactcta
atttttgaccaaaacttttcaggagcctacgaaggtcaaatatcaggtaatggtactcta
gttaaagatggaactgaaagattatcttttattggagttgatgattttgcaggtaatact
attattcaaaacgggactcttgtcattcctgtcaaagaaaaatttgccagcaattctgtt
aatgtaatgcgtggcacactgcaaaataatggaacaatcaatgcaggcgttgttaccaac
tatggctatatttttggctctggaacattcaatataagcattatgaagaacttcggtttt
gtagaaccagggaattctattggaacccttacaatcaacgggaattatacgcaagaccca
tctggtagattaggtatagaaattgatgttataggaggaagcgatctactagaagtgaca
gggatggcctcgttgaacggggagcttctcatcaagcctacacccggagtttatttagaa
ggaacaacctatacttttcttactgcagaatctgtcacaggacaatttagccgtactgtt
attagtaggccctttgattacaccatcaattatttgcctaaccaagttcaactcttttaa
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