Candidatus Rhabdochlamydia oedothoracis: RHABOEDO_000099
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Entry
RHABOEDO_000099 CDS
T07398
Name
(GenBank) RecBCD enzyme subunit RecC
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
rhaw
Candidatus Rhabdochlamydia oedothoracis
Pathway
rhaw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhaw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RHABOEDO_000099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhaw03400
]
RHABOEDO_000099
Enzymes [BR:
rhaw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RHABOEDO_000099
DNA repair and recombination proteins [BR:
rhaw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RHABOEDO_000099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QYF48010
UniProt:
A0ABX8V4Q0
LinkDB
All DBs
Position
complement(112785..115874)
Genome browser
AA seq
1029 aa
AA seq
DB search
MKSCKEEISCPSIALPCTFSQNIESLADKLKQDLIASSTHPFSKKIIITPSQSIKEYLIG
FFAKELEIVTGIQFLSLKQAINEWLFPFGKKMPDSIEISLVLEEIIEQSWQKDEMSKLYS
YIACEEKSKRSKRIIGLSDQLSNIFEEYGAYGLHFLPIWIKKSGWQQTLWNQIFSSYPNW
TYPLEATQFLQTQTRSIFVFGFSFLPLSYLKILKQVGSLFYFFSPCELFWEDVHTDRERS
YLRKKLAQRGISIEKREELNHYDAAAHPLLANWGKLGRALLKNLDLFSLTSTEIYELKKE
SNNLQKLQEQILCFERTKPISQADSSLQLHSAPTKLREVEVLFDILTTLIQKNSISLDQI
IVLAPDITLYASYIEMIFANHPLPYTIENVPIFSNSTAHGFLLLKKVLDESFSLNSIYAL
LEETIFCAKQGWSLDRSKQIKQWLKTASIRQEEEACNWDAGISRLLLGIVTLEPLESHWP
IDVIALTDIELFSDFLCVFTSLQQDLSPLRSEKMTIGSWLLYIEALLLKYFDVENNEFLR
EIKQLQKRSQNLSLLHNYESIERIMDRLLRKKTKFQKTQHLRQIHFRSLQEGCIYPSQVI
WMLGMNEELIPRMLQSSSLSELSQNPGLDYIPTCAEQDRYLLLEALFSAQKHLLFSYERI
DSKDQKPKGCSFLIEELQACVALQIIDHPNLPFDSIYFQDHSQIKKSQIDYQAAKSYYFP
NSQNKPFLAQDQTQPVTIPIIDVKQLYKLAKNPIRFFCQDVFQIFLEKEEPAGDFLFSNY
QKAIFTKEVRTRPLHELLAQLEAQGKLPIGLFKDLALKKLQSEVAQMQKTLLHFDLQLNS
LFSVSLSKECRKIEQLKCGNWIVPAIEIPFENQKIHIIGTLTDLSIKGLISKESNHLEGL
IQIWPIYLIYLVLQSEMNMKASLFSLKDDSCLPLEIKDPISSMQKYLSYFFYARQTISPL
KTNWAKALLLGTKSDFEKILLDENQLSTRIQDAYEKWLERRGFCFDAQETWNYWTPIFQS
VFSELIGSL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcttgtaaagaagagatctcttgtccttcaatagctctaccttgtacatttagc
caaaatatagaaagtcttgccgataaactaaaacaagatctaattgcttcttcgacacat
ccctttagtaaaaaaatcattatcacacctagtcaatccattaaggaatatctaattggt
ttttttgcaaaagagctggaaattgttacaggaatccaatttctttctttaaaacaggcc
atcaatgaatggctatttccttttgggaaaaaaatgccggattctatagaaatttctctg
gtactagaagagattatcgaacaatcttggcaaaaagatgaaatgagcaaactgtattcc
tatatcgcttgtgaagagaagtctaaaagaagtaagagaattataggtcttagcgatcaa
ctgtctaatatatttgaagaatatggtgcctatggactacattttttacctatctggatc
aagaaatcaggttggcaacaaacattgtggaatcaaatattctcttcttaccctaactgg
acctatcctctagaagctactcaatttttgcaaacacagactagatccatttttgtattt
gggttttcttttctccctctttcttatttaaaaatactcaaacaagtcgggtctcttttt
tatttcttctctccttgtgagctcttttgggaagatgttcatacagatcgcgaaaggtcc
tacttacgaaaaaaactagctcaaagaggaatcagcattgagaaaagagaagaactaaat
cattatgatgcagcagcgcatcctctcctagctaattggggaaagctaggaagagctctt
ttaaaaaacctcgacctcttttccttaacaagcacagaaatctacgagttaaaaaaagaa
agtaacaacctacaaaaattgcaagaacagattctttgctttgagcgcacaaaacccatc
tcccaagccgattcttccctacaattacatagcgctcctacaaaacttcgcgaagtagaa
gtcctttttgatattcttacaactcttatacaaaaaaattctatttctcttgatcaaatc
atcgtattagctcctgatataacattgtacgcctcttatatcgaaatgatttttgcaaat
catccactaccttataccatagaaaatgtacctattttttctaatagcacagctcacggt
tttcttttactaaagaaagtactagatgaaagcttttctctaaattctatttatgccttg
ttagaagaaacgatcttttgtgcaaaacaaggatggagtcttgatcggtctaaacaaatt
aaacagtggttaaaaacagcttctattcgtcaagaagaagaggcttgtaattgggatgct
ggtatttctcgtcttttactaggcattgttactctagaacctttagagtctcactggcct
atagatgtgattgctcttacagatatagagcttttttccgactttttgtgcgtatttacg
tctttacaacaggatttatcgcccttgcgatctgaaaaaatgactattggatcgtggcta
ttatatatagaagcccttttattaaagtattttgatgtagaaaataatgagtttttacga
gaaatcaaacagctgcaaaaaagatctcaaaacctctctcttttgcataattacgagagc
atagaacgcattatggatcggctacttcgtaaaaaaaccaaattccaaaaaacacaacat
ttaagacaaatccatttccgttctttacaagaaggctgtatctatccttcccaagtgatt
tggatgttagggatgaacgaagagctcattcctcgaatgctccaaagctcttctttatca
gaactatcccaaaacccaggattggattatatccctacatgcgcagagcaagatcgttat
ctattattagaagcgctcttttctgctcaaaagcatcttttattcagctatgagagaata
gattctaaagatcaaaaacccaaagggtgttcttttctcatagaagagctgcaagcctgt
gtagcgctgcaaatcatcgaccatccaaatctgccttttgactctatctactttcaagat
cattctcagataaaaaaatcacaaatcgattatcaagcagctaaatcttattattttcct
aactcacaaaataaaccttttcttgcacaagatcagacacaacctgtaacgattccaata
attgatgtaaaacagctgtacaagctagccaaaaatcccattcggtttttctgccaggat
gtctttcagatattcttagaaaaagaagagcctgctggtgattttttattttctaactat
caaaaagctattttcactaaagaagtgcgtacaagacctttacatgaactacttgcgcaa
ttagaagctcaaggcaaacttcctattggattgttcaaagaccttgctctgaaaaaatta
cagtcagaagtagctcaaatgcaaaaaacccttctacattttgacctacaactaaattct
cttttttctgttagcctatctaaagaatgtagaaaaatagagcagcttaagtgtggtaat
tggatagttcctgctattgaaatcccttttgaaaatcaaaagattcatatcattggaaca
ttaacagatctatcaataaaaggacttatttctaaagaatctaatcatttagaaggtttg
attcaaatatggcctatttatctgatttatttggttctacaatcggaaatgaatatgaaa
gcctccttgttttctttgaaagacgactcttgtttacctctggaaattaaggaccctatt
tcatctatgcaaaaatatcttagttattttttttacgctcgtcaaactatctctcctctt
aaaaccaattgggctaaagctctgcttttagggactaaaagcgatttcgaaaaaattctc
ctagatgagaatcaactttccacaagaatacaagacgcgtatgaaaaatggttagagcgt
cgtggattttgttttgacgcccaagaaacctggaactattggactcctatattccaaagt
gtattttctgaactcattggttctctatga
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