Candidatus Rhabdochlamydia oedothoracis: RHABOEDO_000187
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Entry
RHABOEDO_000187 CDS
T07398
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rhaw
Candidatus Rhabdochlamydia oedothoracis
Pathway
rhaw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhaw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RHABOEDO_000187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhaw03019
]
RHABOEDO_000187
03110 Chaperones and folding catalysts [BR:
rhaw03110
]
RHABOEDO_000187
03029 Mitochondrial biogenesis [BR:
rhaw03029
]
RHABOEDO_000187
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhaw04147
]
RHABOEDO_000187
Enzymes [BR:
rhaw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RHABOEDO_000187
Messenger RNA biogenesis [BR:
rhaw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RHABOEDO_000187
Chaperones and folding catalysts [BR:
rhaw03110
]
Heat shock proteins
HSP60 / Chaperonin
RHABOEDO_000187
Mitochondrial biogenesis [BR:
rhaw03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RHABOEDO_000187
Exosome [BR:
rhaw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RHABOEDO_000187
Exosomal proteins of other body fluids (saliva and urine)
RHABOEDO_000187
Exosomal proteins of breast cancer cells
RHABOEDO_000187
Exosomal proteins of colorectal cancer cells
RHABOEDO_000187
Exosomal proteins of bladder cancer cells
RHABOEDO_000187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF1759
divDNAB
Motif
Other DBs
NCBI-ProteinID:
QYF48088
LinkDB
All DBs
Position
205170..206843
Genome browser
AA seq
557 aa
AA seq
DB search
MAKMLQFNQEALKSILEGMKKLARAVAATMGPKGRNVVINKGGKSPLCTKDGVTVAQEIF
LKDTFENVGAQLVKQASSKASDVAGDGTTTAIVLAYAIYKEGMKNVGAGANPMLLKKGMD
KAVSHLLAALDKLATPVASNEEIKQIATVSANNDAEIGEIIAAAMQKVGQDGIITIAEAK
GIDTLLNVVEGMQIDKGYLSPYFVNNAEKMIIEYENPLILITDKKLSQAKELVPILEKVK
EIQRPLLIIAEDMEEEVLTTLVINKLGESPLPVCAIGAPSFGDRRKALLEDIAILTGATL
ITENLGLFVKNVGLEVLGTAKSIKISKDSATIIDGFGDKKTIQARIAFLRAEIERETSDY
AKQHLEERLAKLSGGVAIINVGAGTETALKEKKERVEDALHATRAAVKEGVVAGGGVALL
RAIKTLDSLICSGDEAVGVEIIRRAAFAPTAAIAHNCGKQGDLIAEKVFEQHGNWGYNGL
TDQFSDLVLDGVIDPVRVTKSALIHATSVSSMLLTINAVITEKPKPKSKAVPSMPNMDGM
MGGGMGGMMGDMGGMGF
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaatgctgcaatttaatcaagaagccctaaaatctattttagaagggatgaaa
aaactagctagagcagtagctgcaacaatgggccccaaaggtcgtaatgttgttattaat
aaaggagggaaatcacctctttgtaccaaagatggagtaactgttgctcaagaaattttc
ctcaaagatacctttgaaaatgtaggagcacaactagtcaaacaagcttctagtaaagca
tcagatgttgcaggtgatggtacaacaaccgcaattgttcttgcctatgctatttataaa
gaaggaatgaaaaatgtgggagctggagcaaatccaatgctgctgaaaaaaggcatggat
aaagcggtttctcatctgttggccgctttagacaagttggctacccctgttgcaagcaat
gaagagattaagcaaattgcgacagtttctgctaataatgatgccgaaatcggagagatt
atagctgccgccatgcagaaagtgggtcaagatggcataatcaccattgcagaagcaaag
gggattgatactctcttaaatgttgtagaaggaatgcagattgataaaggatatctctct
ccctactttgtgaataatgcggaaaaaatgatcattgaatatgaaaaccctttgattttg
ataacggataaaaaattatcacaagctaaggaattagttcctattcttgaaaaagtaaaa
gaaattcaacgacctttattaattatcgcagaggatatggaagaagaggtgctcaccact
ttagttatcaataaactaggagaatctccgctacctgtgtgtgctattggggctccttct
tttggtgataggaggaaagctcttttagaagatatagcgattcttacgggggctacttta
attacagagaacctaggactttttgtaaagaatgtaggtctagaagttcttggaacagca
aagagcattaaaatctccaaagattccgctacgattatcgatggttttggcgataaaaaa
acgattcaagctagaatagcttttttacgagcagaaattgaaagagagacctcagactat
gcaaaacagcatttggaagaaagattggctaaattatctggtggggtagctattatcaat
gtaggggctggtactgaaaccgcgcttaaagaaaaaaaagagcgtgttgaagatgctcta
catgcaactcgcgctgctgttaaggaaggggttgtagcaggaggaggagttgcgctttta
cgagctattaagacactagattctcttatatgtagcggcgatgaagcagtcggtgtagaa
atcatccgtagggctgcatttgctcctacggctgcgattgctcataattgcggcaagcaa
ggggatttgattgctgaaaaagtgtttgagcaacatggtaactggggctataatggcctt
acagatcaatttagcgatttagttttagatggagtcatcgatccagtgcgtgtgacaaaa
agcgctcttatacacgccacttctgtttccagcatgttattaacaattaatgctgtaatt
acagaaaaacccaaacccaaatcaaaagcggttccttctatgcctaatatggatggtatg
atgggcggtggtatgggaggtatgatgggtgatatgggaggtatgggtttttaa
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