Candidatus Rhabdochlamydia oedothoracis: RHABOEDO_000590
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Entry
RHABOEDO_000590 CDS
T07398
Name
(GenBank) Poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rhaw
Candidatus Rhabdochlamydia oedothoracis
Pathway
rhaw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhaw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RHABOEDO_000590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhaw03019
]
RHABOEDO_000590
Enzymes [BR:
rhaw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
RHABOEDO_000590
Messenger RNA biogenesis [BR:
rhaw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RHABOEDO_000590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
PolyA_pol_arg_C
Herpes_BBRF1
CTD2
Motif
Other DBs
NCBI-ProteinID:
QYF48429
LinkDB
All DBs
Position
complement(609742..610992)
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AA seq
416 aa
AA seq
DB search
MSQRIYSFEEHQLCMKKVDSDALYVMQKLRAAGYIAYLVGGSVRDLLLHKNPKDFDICTS
AQPEEIKKIFRNCILVGRRFRLAHIRFGKKTLEVSTFRSGDNELDELIVRDNKWGTAKED
ALRRDFTINALFYDPDSQSIIDYIGGFEDIKKQILRTIGQPFIRFRQDPVRMLRMLKFQA
RFGFTIDDPSHVALLECRQEIMKSSPARILEELLRMLESKASEPFFRLLAEHGFMYLLMP
SLGDFLDSKDAEEVFSFLKEIDNYFMKSDHINLSRAVLLAALAFPILEKKIYTHYMNRDI
ILHLGQINEEIHELLDEMFRPFINLSRRLRTSLQSILVSQYRITPFDSKKPRRIRIPQDP
DFMQAMQFFEIRCTLEPALKVVWQQWNHALTNPASNKRRRRKKKVKTDETPSSSAT
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
gtgtctcaacgcatttattcttttgaagaacatcagctttgcatgaaaaaagttgactcc
gatgcgctgtatgttatgcaaaaacttcgcgctgcaggttatatagcctatctagtcgga
ggaagtgttcgagatctgctgctgcataaaaatcctaaagattttgatatctgcacatct
gcacaaccagaagaaataaaaaaaatattcagaaattgtattttagtaggaaggcgtttt
cgccttgctcacattcgatttggaaaaaaaacattagaggtttccacctttcgttccgga
gataatgagctcgatgaattgatcgtacgcgacaataaatggggaacggcaaaagaggat
gctttaagacgtgattttaccattaatgcattgttttacgatccagactctcagtcaatt
attgattacattggaggttttgaagatataaaaaaacaaattctgcgcactattggccaa
ccttttattcgttttcgtcaagatcctgttcgcatgctaagaatgcttaaatttcaagca
aggtttggttttaccattgatgatccttcacatgttgctttgcttgaatgtcgtcaggaa
attatgaaaagctcgcctgcacgcatattggaagagttgctgcgcatgttggaatctaaa
gcttcggagcccttttttcgtcttcttgcggaacatgggtttatgtatttgttaatgcct
tcactaggagattttttagattctaaagatgcagaagaggttttctcttttctaaaagaa
atcgataattacttcatgaaatcggatcatataaacctttcacgcgctgttttattagct
gccttggcatttcctatactggaaaaaaagatctatacacattatatgaatcgagatatc
atcctgcatttaggacagataaacgaagaaatacatgagctacttgatgaaatgtttcgc
ccctttataaatctttctcgtagattacgtacaagcttgcagtcgattttggtttcgcaa
tatcgcattactccttttgattctaaaaagccacgacgcattcgcattcctcaagatcca
gattttatgcaagctatgcaattttttgaaattcgctgtacattagaaccggctcttaaa
gttgtatggcaacaatggaatcatgcccttacaaaccctgcatctaataagcgacgacga
cgtaaaaagaaagtaaaaacagatgaaaccccttcctcctcagcaacttaa
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