Candidatus Rhabdochlamydia oedothoracis: RHABOEDO_000694
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Entry
RHABOEDO_000694 CDS
T07398
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rhaw
Candidatus Rhabdochlamydia oedothoracis
Pathway
rhaw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhaw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RHABOEDO_000694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhaw03019
]
RHABOEDO_000694
03016 Transfer RNA biogenesis [BR:
rhaw03016
]
RHABOEDO_000694
Enzymes [BR:
rhaw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RHABOEDO_000694
Messenger RNA biogenesis [BR:
rhaw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RHABOEDO_000694
Transfer RNA biogenesis [BR:
rhaw03016
]
Prokaryotic type
tRNA degradation factors
RHABOEDO_000694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KH_NusA_1st
KH_2
KH_N4BP1_2nd
CsrA
Motif
Other DBs
NCBI-ProteinID:
QYF48517
UniProt:
A0ABX8V1Y7
LinkDB
All DBs
Position
complement(711542..713680)
Genome browser
AA seq
712 aa
AA seq
DB search
MQFDHQEITVSIEEGKTITFETGIVARQANGAVILTCGETLLLSTACQGNIPSAETDFLP
LRIDYQEKFSSSGKTLGGFIKREGRPTGKETLVCRLIDRPLRPMFEKGYFNEVQVLSYVL
SYDGINAPEPLAICAASAALVISDIPLIKPIGAVRVGMIGGKFIINPTVEEQKSSKLDLI
LAGTEEAILMIEGYADFLAEEQILVAIEKGHAAIRMICQTLSKWQTQIGKPKNPGELKLL
STDLIDDMREKISVHLNTALRIKEKLDRESAIKALFTEMLTQYTDRDLVYTELEIKSAFK
KLQAELLRKMILNENIRADGRRSDQVRSIDIKPSFLPRTHGSALFTRGETQSLSVCTLGG
ENMAQRSENLDGEVSDRFYLQYFFPPFSVGEVGRLGAPGRREIGHGKLAERSLAKTIPSI
DVFPYVIRLESNITESNGSSSMASVCGGCLALMDAGVPIKRPIAGIAMGLILEDTRFAIL
SDILGLEDALGDMDFKIAGDMEGITAFQLDIKVEGITIEVMQAALAQAKQGRLHILHKML
ETCPKSKENLSSYAPRIETVMIKPSKIGTLIGPAGKQIRAIIEETGAQIDIDDSGRVSIA
STNSESMNRAKEMIHNLTTDVEIGKTYKGKVVSIVNFGAFVEIYGRECLCHISELSYSRV
QNVEEVLKLGDIIEVKVLDINDRGQVKISHKATLPTSQKDVAHRDCRRGCGG
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttgaccatcaggaaataactgtatctattgaagaaggaaaaaccataactttt
gaaacaggcatagtggctcgtcaagcaaacggcgccgttattttaacttgcggagaaacc
cttttattaagcaccgcttgccaaggaaatataccttctgcagaaacagattttcttcct
ttacgcatagattatcaggaaaaattctcttcttcaggaaaaactttaggtggttttatt
aaacgcgaaggacgtcctacgggaaaagaaaccctcgtttgtcgattaatcgatagacct
ctaaggcccatgtttgaaaaaggatactttaatgaagtccaggtcctctcttatgtttta
tcctatgatggaataaatgcgcccgagcctttagctatttgtgcggcttcagcagcactt
gtcatttccgatattcctttaattaaacctattggagctgtacgcgttggaatgattgga
gggaaatttatcatcaatccaactgtggaagaacagaaatcctctaaattagatctcata
ttagctggaacagaagaagctattttaatgattgaaggatacgctgattttcttgcagaa
gagcagattttagtagctatagaaaaaggtcatgctgccattagaatgatttgccaaact
ctaagtaaatggcaaacacagatcggcaagcccaaaaaccctggagagttaaaactctta
tctacagatttgatcgatgacatgcgtgagaaaataagcgttcatctaaatactgcacta
aggatcaaagaaaaattggatagagagtccgctattaaagcgctatttacagaaatgctc
actcaatatactgatagagatcttgtatacacagaattggagattaaaagcgcatttaaa
aaacttcaagccgaacttctacgtaaaatgattttaaatgaaaacatacgcgctgatggc
cgaagatcagatcaagttcgctctattgatattaagccttcttttttaccccgtacacac
ggcagcgctttatttacaagaggagaaactcaatctttatctgtttgtacacttggtgga
gaaaatatggcgcaacgctctgaaaatttagatggagaggtttcagatcgcttttattta
caatacttctttcctcctttttcagtcggtgaagtaggacgcttgggagcccctggaaga
cgagaaattggtcatggcaaattagcagagcgctcattagcaaagaccattccttccata
gatgtatttccctatgttattcgcttagaatcaaacatcacagaatctaatggatcttcc
tccatggcatctgtttgtgggggttgcctagccttaatggatgcaggcgtaccgattaaa
agacctatagcaggaattgctatgggattaattttagaagatacaagatttgctattctc
tccgatattcttggattagaagatgctttaggcgatatggattttaaaattgcaggagat
atggaaggaataaccgctttccaactcgatattaaagtagaagggattaccatcgaggtt
atgcaagcagcattagctcaagctaagcaaggaagacttcacattctacacaaaatgctt
gaaacatgtcctaaatctaaagaaaatctttcctcctatgctcctcgtattgaaaccgtt
atgattaaaccttcaaaaattggaacattaattggaccagcaggtaagcaaattcgcgcc
attattgaagaaaccggtgcgcaaatcgatatcgatgatagtggtcgtgttagcattgca
tccaccaatagcgaatcgatgaacagagcaaaagagatgattcacaacctaacaactgat
gtagagattggaaaaacttataaagggaaagtggtatccattgttaattttggtgctttt
gtagaaatctatggcagagaatgcctctgtcatatctctgagctctcttatagcagggtt
caaaatgtagaagaagtactaaaactaggcgatatcattgaagttaaagtcttagatatt
aacgatcgtggccaagttaagatcagtcataaagcaactcttccaacctctcaaaaagat
gtagcacatagagactgcagaagaggctgcggaggctaa
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