Candidatus Rhabdochlamydia oedothoracis: RHABOEDO_000746
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Entry
RHABOEDO_000746 CDS
T07398
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rhaw
Candidatus Rhabdochlamydia oedothoracis
Pathway
rhaw03030
DNA replication
rhaw03430
Mismatch repair
rhaw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhaw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RHABOEDO_000746
03430 Mismatch repair
RHABOEDO_000746
03440 Homologous recombination
RHABOEDO_000746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhaw03032
]
RHABOEDO_000746
03400 DNA repair and recombination proteins [BR:
rhaw03400
]
RHABOEDO_000746
Enzymes [BR:
rhaw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RHABOEDO_000746
DNA replication proteins [BR:
rhaw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RHABOEDO_000746
DNA repair and recombination proteins [BR:
rhaw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RHABOEDO_000746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
QSregVF_b
RNase_H_2
Rv2179c-like
ExoX-like_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QYF48562
UniProt:
A0ABX8V232
LinkDB
All DBs
Position
complement(761140..761856)
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AA seq
238 aa
AA seq
DB search
MKKLRPIYYDTETTGVKSAKDRIIEIAAYDPIEDRSFVELINPECPIPKEASAIHHITDE
MVKDAPSFKVIAEKFTQFCPDNTVLIAHNNDAFDQLFLEAEFKRAEVPLPFFQYIDTLKW
ARKYRNDLPRHSLQFLRETYGFSANQAHRALDDVIILHQVFSVMIDDLPIQTVLQLLSKP
QVVSRMPFGKHQGKPLEEVPRNYVTWLASSGAFDKPENKELKQGFEKLGILTPLLTKT
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattacgacctatttactacgatacagaaacaactggcgtaaagtctgctaaa
gatcgaattattgaaattgctgcttatgatccgatagaagatcgttcctttgtagagtta
atcaacccagaatgccctattccaaaagaagctagtgctatccatcacattactgatgaa
atggtaaaagatgctcctagctttaaagtaattgcggaaaaattcacacaattttgccct
gataatacggtgttaatcgctcacaataatgacgcctttgatcaattgtttttggaagca
gaatttaaacgagcagaagttcctcttcccttttttcaatatattgacacccttaaatgg
gcacgtaaataccgcaatgatctccctaggcattctctacagtttttaagagaaacctat
ggtttctccgctaatcaagcacatagagcgcttgatgatgtaattatactgcaccaagtt
tttagcgttatgattgatgatttgcccattcaaacggtattgcaacttctttctaaaccc
caagttgtatctcgcatgccatttggtaaacatcaaggcaagcctttagaagaggttcct
cgtaattatgtcacatggctagcatctagtggtgcttttgataaaccggaaaataaagag
ttaaagcaaggttttgaaaaattaggaattttaactccacttcttacaaagacttaa
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