Candidatus Rhabdochlamydia oedothoracis: RHABOEDO_001192
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Entry
RHABOEDO_001192 CDS
T07398
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rhaw
Candidatus Rhabdochlamydia oedothoracis
Brite
KEGG Orthology (KO) [BR:
rhaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhaw03400
]
RHABOEDO_001192
Enzymes [BR:
rhaw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RHABOEDO_001192
DNA repair and recombination proteins [BR:
rhaw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RHABOEDO_001192
Prokaryotic type
RHABOEDO_001192
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QYF48948
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Position
1218662..1220068
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AA seq
468 aa
AA seq
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MTTIIWFQRDLRIQDNPALKYASQLQLPVLPIYIFDPKEDKNWSMGSSSRWWLHYSLQSL
QKKLKALGLDLFFFQGATLHALQKIIDKVDAKHIVWNYCYEPSALMREKKLMKLASAKKC
IAKGFHANLLFVPGQMTTKQGNPYQVFTPFWRCCLKQEIGKPEGKVTKKLRLATYSKHIS
LGALDLLPHIPWAKDFPYLWQPGEDNALKKWKHFLRSKIHQYAHERDFPAEMGTSMLSPH
LHFGEISVKRIFEDLLQNTHAEVFLREIGWREFAYHLLITFPHTPSKPLRAQFTHFPWKR
KAKCLKAWQKGMTGIPIVDAGMRQLWQLGWMHNRVRMIVASFLVKDLNVPWQEGAKWFWD
TLVDADLANNTLGWQWCAGCGADAAPYFRIFNPFTQGKKFDPKAEYVRQFVPELRNLPNS
WIHTPHLSPKSVLEAAGVYLGKNYPYPIVDHDLARKNAIQIYHQWTKK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaattatttggtttcaacgcgatctgcgaattcaagacaatcctgccttaaaa
tatgcttcccaactacagcttcctgttttacccatatatatatttgatccaaaagaggat
aaaaactggtcaatgggttcaagctctcgctggtggctgcactattctctgcaatctttg
caaaaaaagttaaaagccctaggtcttgatttatttttcttccaaggcgcaactttgcat
gcattgcaaaagattatagataaggtagatgcaaaacatatagtttggaattactgttat
gagccaagcgcgctaatgcgtgaaaaaaaactgatgaaactagcctctgcaaagaagtgc
atagcaaaaggatttcatgcgaatctactatttgtacccggtcaaatgactactaagcag
ggtaatccctatcaagtattcactcctttttggcgatgttgcttaaaacaagaaataggt
aagccagagggtaaagttacaaaaaagttacgattagccacgtattctaaacatatatct
ttaggtgcattagatttattgccgcatattccttgggctaaagactttccttatctttgg
caaccaggagaagacaacgctttaaaaaagtggaagcatttcttgaggagtaagatacat
caatatgctcatgaacgcgattttcctgcagagatgggaacatcaatgctttcccctcat
ttgcattttggtgagatttctgtgaaaagaattttcgaagatttgctacagaatacccat
gcagaggtttttttaagagaaatagggtggcgagaatttgcttatcatcttttaatcact
tttcctcatactccttcaaaaccactaagagcacaatttacccatttcccttggaaaaga
aaggcgaaatgtctcaaagcttggcaaaaaggcatgacaggaattcctattgtcgatgct
ggtatgcggcaattatggcaactaggctggatgcacaatcgagttcgtatgatcgtagct
tcttttttggtcaaagacttaaatgttccttggcaagaaggagcgaaatggttttgggat
accttagtggatgcagatcttgcaaacaataccttaggttggcaatggtgtgcaggatgt
ggtgcggatgcagctccttattttcgtatatttaatccatttactcagggaaaaaaattc
gatccaaaagcagaatacgtacgccaatttgttcctgaattgagaaatctgcctaattca
tggattcacaccccgcatttaagtcctaagtctgtgttagaagcagcgggtgtttacttg
gggaaaaactatccttaccccatagtagatcacgatcttgcgcgcaaaaatgcaatacag
atttaccatcaatggactaagaaataa
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