Candidatus Rhabdochlamydia oedothoracis: RHABOEDO_001251
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Entry
RHABOEDO_001251 CDS
T07398
Name
(GenBank) RNA pseudouridylate synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
rhaw
Candidatus Rhabdochlamydia oedothoracis
Brite
KEGG Orthology (KO) [BR:
rhaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhaw03009
]
RHABOEDO_001251
Enzymes [BR:
rhaw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
RHABOEDO_001251
Ribosome biogenesis [BR:
rhaw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RHABOEDO_001251
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Dict-STAT-coil
Motif
Other DBs
NCBI-ProteinID:
QYF49001
UniProt:
A0ABX8V1I2
LinkDB
All DBs
Position
complement(1276250..1277122)
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AA seq
290 aa
AA seq
DB search
MKKILCKAQLEREYKGMSLLAFLRLQCTDISVKSLKSAIDTKLCTVNGIVERFSTHPLKI
GDVVILYQPQTLHPKHLEILYQDEHLLICNKPAMLISDMRSLQPLLKDRWLLGHRLDKET
SGALIFVKNKLILQKLIALFKEHSVEKFYLALVDGQVLQEERKIDKPIAKLKNYQGQSLY
GVATKPGAKRAVTLWRCLKRSKTASLLLCQPMTGRTHQLRVHLSYMGYPILGDTLYAKHF
FCRTSVIRHLLHAYILRFPNPISHQIITVKAKIPEDFKECLKELKMTHAI
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagattctgtgtaaagctcaattggaaagagagtataaagggatgtctttactt
gcgtttttaaggctgcaatgcacagacatctcggttaagtctctaaaatctgcaattgat
acaaagttgtgcactgtaaatggaatcgtcgagcgcttttctacccatcctctaaagata
ggggatgtggtgatcttatatcagccccaaactcttcatccaaaacacttagaaatctta
tatcaagatgaacacctgcttatctgtaacaaacccgcaatgttaatcagtgatatgcgg
tccctacaacctttattaaaagatagatggttactgggtcatcgtttggataaagagaca
tcaggtgctttaatttttgtgaaaaataaactcattttacaaaaattgattgctttattt
aaagagcactctgtagaaaagttttatctagcactagtggatgggcaagttttgcaagag
gaaagaaaaatagataagcctattgcaaaattaaaaaactaccaaggacagagcctatat
ggagtagctactaaacctggtgctaaaagagctgttactttatggcgttgtttaaagcgt
agtaaaaccgcttctcttcttctatgccaaccaatgaccggtaggacgcatcagcttcgt
gtacatttaagttatatgggatatcccattttaggcgataccctctatgcaaaacatttt
ttttgcagaacctctgttatacgtcatttgttgcatgcgtatatcttgcgtttcccgaat
cctatttctcatcaaataataacagtcaaggctaaaattccagaggattttaaagagtgc
ttaaaagagctcaaaatgacacatgcgatttaa
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