Candidatus Rhabdochlamydia oedothoracis: RHABOEDO_001366
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Entry
RHABOEDO_001366 CDS
T07398
Name
(GenBank) Primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rhaw
Candidatus Rhabdochlamydia oedothoracis
Pathway
rhaw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhaw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RHABOEDO_001366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhaw03400
]
RHABOEDO_001366
Enzymes [BR:
rhaw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RHABOEDO_001366
DNA repair and recombination proteins [BR:
rhaw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RHABOEDO_001366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
ATPase_2
ADDB_N
DAP3
AAA_19
AAA_30
AAA_16
PIF1
Zot
AAA_22
IstB_IS21
nSTAND_NTPase5
zf-ChsH2
Motif
Other DBs
NCBI-ProteinID:
QYF49100
UniProt:
A0ABX8V6L5
LinkDB
All DBs
Position
1406608..1408836
Genome browser
AA seq
742 aa
AA seq
DB search
MSDLNSGSIVSVILDQAINMTLDYKVCPSFIGRIYIGSRVKVPLQGSTRLATVIEIKQNS
PVKKLRKIIELLDTPVLPKDLVSLAKWMAHYYCCPLRKVLQVILPPSVRKDTGTKQQLFI
KPLLDKSRLKELCESLRLTSHTQAEVVSTLLQAPKGLLLSELMEKANVSRSPINTLIKKN
ILSCSSITIDRSKLLEWEFFRTKPKALNPEQVKALESIKHSLNTNLFQTHLLYGVTGSGK
TEVYLQAIQHALEQGKSIIFLVPEIALTSQTIERLRSRFLQKLSILHYRISAGEKRDAWH
NIATHITPIVIGARSAIFSPTCHLGLIIVDEEHESSYKQTEESPRYHARDIAVMRAKLNQ
ATVILGSATPSLESYQNTLLDKYHLNTLSKRADKAHLPQIQIVDMRPQYQKAKGFTLFSE
ILIEKIKQKIALGEQVLLFLNRRGYHTSQLCLNCSYVISCPHCDISLTFYFKENRFTCHL
CDFSLFPPPKSCPKCHAEGQLKFKGVGTELVERSLKALLPEARTLRIDRDTTRHKGSHEL
LLKQFRTGKADVLIGTQMIAKGLHFPLVTLVGVLMADSNLQIPDFRASETTFQLLTQVAG
RSGRGSLLGEVLIQTLLPEHMILSLAQQQNFEGFFAQEIQTRRLFCYPPFTRLVKLIFSG
KIESQVVEYAEKIRKDLKRKLINNCEILPLIACGHAKIKDLFRYQFLIKAKKLIPILLPL
HQIPQHKEIKLSIDVDPLSTFF
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcttaactccggcagcatcgtctctgtaattttagaccaagctattaatatg
actcttgactataaggtctgtccgagctttataggtcgtatttatattggatctcgtgta
aaggttcctctacaaggatctaccagattagctacggttatcgaaattaagcaaaactct
ccagtaaaaaagctacgtaaaatcatcgagcttttagatacgcctgttttacccaaagat
ctagtctctcttgctaaatggatggcacattactattgctgtcctttacgtaaagtcttg
caagttatcctgccacctagcgtgcgcaaagatacagggactaaacaacagttatttata
aaacctcttcttgataaatcaaggttaaaagagttatgcgaaagcttgcgtttaacctct
catacgcaagctgaagtagtatcgactcttctacaagctcctaaaggattattgcttagt
gaactgatggaaaaagcaaatgtctctcgtagccctattaatacactgattaaaaaaaat
atactaagttgctcttcgattaccattgatcgctctaaattgttagaatgggagtttttt
agaaccaaaccaaaagcattaaatcctgaacaggtaaaagcgcttgaatctataaaacac
agcttaaatacaaacctgtttcagacacatctactatatggagtgacgggaagtggaaaa
acagaagtatatttacaagctattcaacatgcactagaacaaggaaaaagcatcatcttt
cttgtgccagaaattgccttaacttctcaaaccattgaaagattaagaagtagatttttg
caaaaattatccattttgcactatcggatctctgctggggaaaaaagagatgcttggcat
aatatcgccactcatatcactcctattgtcattggagctagatctgctatatttagccct
acttgccacttaggtctaatcattgttgatgaagaacatgagagctcttacaaacaaaca
gaagagtctcctagataccatgcacgtgatatagctgttatgcgtgctaagctaaaccaa
gcaacagtaatcctgggcagtgcaacacctagcttagaaagctatcaaaatactctttta
gataaataccatttaaatacgttgtccaaacgagcggacaaagctcatttgccacaaata
caaatcgttgatatgcgccctcaatatcaaaaagccaagggattcactctattttctgaa
atattgattgagaaaattaaacagaagatagcacttggtgaacaggttctgcttttttta
aaccgaaggggctatcacacttcacaactatgcttaaactgttcatacgttataagttgt
cctcattgcgatatctctttgaccttttatttcaaagaaaaccgatttacgtgtcatcta
tgcgacttctctcttttccctccccctaaatcttgtcctaaatgccatgcggaaggacaa
ctaaaatttaaaggggtcggcacagaattagtagagcgttctttaaaggctcttctacca
gaagcgcgcacactgcgtattgacagggatacaactcgtcacaaaggaagccacgaacta
ttattaaaacagtttcgcacaggcaaagctgatgtgttgatcggaacacaaatgatcgca
aaaggcctgcattttcctttagtgacattagtaggtgttctcatggctgatagcaacttg
caaattcctgatttccgagctagtgaaaccaccttccaattgctcacgcaagtagctgga
agatctggaagaggatctctattaggagaagtgctcatccaaacccttcttccagagcac
atgattctctctctagcacaacaacaaaactttgaaggtttttttgctcaagaaatacaa
acacgtaggctattttgctatcctccttttaccaggcttgtaaaactgatttttagcgga
aaaatagaatcccaagttgtagaatatgcagaaaaaattcgaaaagatctaaagagaaaa
ctgataaataactgtgaaattctaccgcttattgcctgcggtcatgctaaaattaaagat
ctattccgctatcagtttctcattaaagcgaaaaaattgatccctatactcctcccatta
catcagataccacaacacaaagagatcaaactctctatcgatgtggatcctttgtccact
tttttttag
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