Rhodococcus sp. B7740: NY08_1479
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Entry
NY08_1479 CDS
T03776
Name
(GenBank) Uracil-DNA glycosylase, family 1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rhb
Rhodococcus sp. B7740
Pathway
rhb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NY08_1479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhb03400
]
NY08_1479
Enzymes [BR:
rhb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NY08_1479
DNA repair and recombination proteins [BR:
rhb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NY08_1479
Prokaryotic type
NY08_1479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AJW39509
LinkDB
All DBs
Position
complement(1556648..1557340)
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AA seq
230 aa
AA seq
DB search
MTPRPLSESVESGWAAALAPVETNVAAMGDFLRAELAAGRHYLPAGENVLRAFRYPFDRV
RVLIVGQDPYPTPGHAVGLSFSVAPDVRPVPRSLSNIFKEYSDDLGLPTPSTGDLTPWSE
QGVMLLNRVLTVEPSQAASHRKKGWEAVTEQAIRALVARAENPDAPGLVAVLWGRDAATL
KPMLGSVPFIESAHPSPLSASRGFFGSKPFSRVNELLVEGGDEPIDWTLP
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
gtgacgccccggccgctgtccgagagcgtcgagtcgggctgggctgctgccctcgctccg
gtcgagacgaatgtcgctgcgatgggcgacttcctgcgagccgaactcgccgccggacgg
cactacctgcccgcgggtgagaacgtgctgcgcgcttttcgctaccccttcgatcgggtt
cgcgtgctcatcgtcggtcaggatccgtatcccacgccgggacacgcagtgggcctgagc
ttttctgtcgcgcccgacgtgcgacccgtaccgcggagtctgagcaacatcttcaaggag
tattccgacgatctcggtctgcccacgccgagcaccggcgatctcacaccctggtcggag
cagggagtgatgttgctcaacagggtgctcaccgtcgaaccgtcgcaggcggcgtcacac
cgcaagaagggctgggaagcggtgaccgagcaagcgattcgggcattggtcgcccgagcg
gagaaccccgacgcgcccggactggtggcagttctctggggacgtgacgcggcaaccctg
aagccgatgctcggatcggtgcccttcatcgaatccgctcatccgtcaccgctgtccgcc
tcacgcggtttcttcggatccaagcccttcagccgcgtcaacgaactgttggtcgagggc
ggagacgaaccgatcgactggacgttgccgtga
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