Rhodococcus sp. B7740: NY08_1489
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Entry
NY08_1489 CDS
T03776
Name
(GenBank) DNA-binding protein HU / low-complexity, AKP-rich domain
KO
K03530
DNA-binding protein HU-beta
Organism
rhb
Rhodococcus sp. B7740
Brite
KEGG Orthology (KO) [BR:
rhb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhb03032
]
NY08_1489
03036 Chromosome and associated proteins [BR:
rhb03036
]
NY08_1489
03400 DNA repair and recombination proteins [BR:
rhb03400
]
NY08_1489
DNA replication proteins [BR:
rhb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NY08_1489
Chromosome and associated proteins [BR:
rhb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NY08_1489
DNA repair and recombination proteins [BR:
rhb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NY08_1489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Borrelia_P83
Mitofilin
Motif
Other DBs
NCBI-ProteinID:
AJW39519
LinkDB
All DBs
Position
complement(1566347..1567036)
Genome browser
AA seq
229 aa
AA seq
DB search
MNKAELIDALTEKLGSDRRSATEAVENIVDTIVRAVHRGESVTITGFGVFEQRRRAARVA
RNPRTGETVRVKPTNVPAFRPGAQFKAVIAGGQKLPATGPAVKRGAAAAPAKKTAAAKKT
AAKKAAVKTTARKATTAAAKKAAPAKTTARKAAAPAKTAAKKAAPAKTTARKTVAKKAPA
KTTARKAATTAAPAKKAPAKTAAKKTVAKKAPAKKAPAKKAPAKRAAKK
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcagagctgattgacgccctgaccgagaagttggggtctgataggcggagc
gccacagaggctgtcgagaacatcgtcgacaccatcgtgcgcgcagtgcaccgcggcgag
agtgtcacgatcacgggcttcggcgtgttcgagcagcgtcgtcgcgcagcccgcgtcgcc
cgtaacccccgcaccggcgagaccgttcgcgtgaagccgaccaacgttccggcattccgt
ccgggtgcgcagttcaaggccgtcatcgccggtggccagaagctgcccgccaccggtcct
gccgtcaagcgcggtgccgctgcggctccggccaagaagactgcggctgcgaagaagacg
gctgcgaagaaggctgccgtgaagacgaccgcccgcaaggcaaccaccgctgccgccaag
aaggcagcaccggccaagaccacagctcgtaaggcagcggctcccgcgaagaccgccgcc
aagaaggcagctcccgcgaagaccaccgcgcgcaagaccgttgcgaagaaggctccggcc
aagacgactgcgcgcaaggccgcaacgactgctgctcccgccaagaaggctccggccaag
acagcggccaagaagaccgttgccaagaaggctccggccaagaaggctccggccaagaag
gcacccgcgaagcgcgcagcgaagaagtag
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