Rhodococcus sp. B7740: NY08_157
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Entry
NY08_157 CDS
T03776
Name
(GenBank) Exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
rhb
Rhodococcus sp. B7740
Pathway
rhb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NY08_157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhb03400
]
NY08_157
Enzymes [BR:
rhb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NY08_157
DNA repair and recombination proteins [BR:
rhb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NY08_157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
DUF6758
Motif
Other DBs
NCBI-ProteinID:
AJW38190
LinkDB
All DBs
Position
165068..168343
Genome browser
AA seq
1091 aa
AA seq
DB search
MLTLHRAERAGTLAAALAEILSVPLDDPFVPEIVSVPAKGVERWLTQRLSSTLGGSHGDG
IAANVDFPSPTRLVSRAIAAVDDIDPDDDPWAPGRVLWTALEVIDECRTETWAAVLFKHL
GAGSEDHRVGRRWSTASHVAELFRTYGSQRPQMLRDWFDGRFTDGHGGDLDEDLLWQPRV
WAAMRERIGSPSPAERLPQTCARLRDAPESVDLPSRLSVFGPTRLTTDQLEILSALSQAR
DVHVWVPHPSPSMWRTLAEIPAVTRRRDDTTALAVEHPLLAGLSRDVRELQATIASVATN
TVHHQGPEAANTLLGRIQADITADSPPSPEFDDGTTFVDGSVQIHACHGPARQVEVLRES
LLHLFAGDPTLEPRDVLVMCPDVETYAPLIRANFGQAALVHPGHRLRVRLADRGLRRTNP
VLDVIATVLDFSEGRVTASELLDFAASGPVREKFSFTDDDLERLREWVASSGARWGLTVR
QREEYGLNGFRQNTFKSALDRILLGVAADETRNEYLDLALPLDDVDSNDITLAGRFAELV
DRLASVLRALAGPASVTEWTRQLGRALDLLADVPTADEWQLAQAHREISDATEHGGTAEL
RLADVRAMLAGRLAGRPTRANFRTGELTVCTMVPMRSVPHRVVVLLGLDDEVFPRVGSID
GDDILARDPAVGERDIRSEDRQLLLDAVMSAEEKLLLFYTGADPVDGSIKPPAIPLRELM
DVLEVTAGASVEHRHPLQPFDPHNFEAEHPFSFDTVALAGAVSQQRTPDPVAPFLLHALP
PTDRGDVELAELIAFVENPVQAFLRQRLGFRVPELEDDLADSLDIELDPLSRWNIGDRML
AAVLAGGDIGEFADAEWRRGTLPPFHQGRREMSDIRQIVGIIADAAAPFHEGPAETVDVA
VDLGDGRRLTGTVTGIHGRTLARSSYSRLAAKHRLAAWVRLLAVAASQPGEWSAVTIGRA
SGMRPPRRSRLTAPRDPAAVLRDLVDLRDRGMTSPLPISTGTASAYAEKRFGGGTIEDGY
ESATWAWRGDFGDGTDRSLRYVHGSTLSFQTLLAATPHADETEPSNEKSRFGILARKLWD
PLLTAENMGNA
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
gtgttgacgctccaccgcgccgaacgcgccggaacactcgcggctgcactcgccgagatc
ttgtccgttccgttggacgatccgttcgtacccgagatcgtgtcggtcccggcgaagggc
gtcgagcgttggctcacccagcgactgtcgagcaccctgggcggttcgcacggcgacggc
atcgcagcgaacgtcgacttcccgagcccgacgcgattggtatcgcgcgccatcgcggcg
gtcgacgacatcgaccccgacgatgatccgtgggctcctggccgggttctctggacggcg
ctggaggtgatcgacgagtgccgcaccgagacctgggcggccgtcctgttcaagcacctc
ggtgccggttccgaggatcaccgggtgggacgccgctggtcgacggcttcgcatgtggca
gaactgtttcgcacttacggatcacaacgtcctcagatgctgcgcgactggttcgacggg
cgtttcaccgacggccacggcggcgatctcgacgaggacctgctgtggcaaccgcgggtg
tgggccgcgatgcgcgagcggatcggcagcccgagcccggccgaacgactgccgcagacc
tgcgcgcgactcagggatgcaccggagtcggtggacctaccgagccggttgtcggtgttc
ggtccgacccggctaaccaccgatcagctcgagatactgagtgcactgtcgcaggctcgg
gatgtgcacgtctgggttccgcatcccagcccgtcgatgtggcgcaccctcgccgagatt
ccggcggtgacgcgccgacgagacgatacgacggctctggccgtcgagcacccactgctg
gccggcctctcgcgagacgtgcgagaactccaggccaccatcgcgtcggtggcgacgaac
accgtgcatcaccagggcccggaagcggcgaacaccctgctcggtcgaattcaagccgac
atcaccgccgattcgcctccgtctcccgaattcgacgacggcacaacgttcgtcgacgga
tcggtgcagattcacgcctgtcacggacctgctcgacaggtcgaagtgctgcgcgagtcg
ttgttgcatctgttcgccggcgacccgacgctcgaaccacgggacgtgctggtcatgtgt
ccggatgtcgagacctatgcgccgctgattcgcgcgaacttcgggcaggcggcgctggtg
catcctggacaccggttgcgggtgcgcctggccgatcgaggcctgcgccgcaccaacccc
gtcctcgatgtcatcgccacggtgctggatttctcggaggggcgggtgacggcgagcgag
ctgttggacttcgctgcgagcggcccggtgcgggagaagttctcgttcaccgacgacgat
ctcgagcgcctgcgcgagtgggtggcgagctccggtgctcgctggggactgacggttcgg
caacgagaagaatacggcttgaacggttttcgccagaacacattcaaatctgcgctcgac
cgcatcctgctgggagtggccgcggacgagactcgtaacgaatacctcgacctcgcgctg
cccctcgacgacgtcgacagcaacgacatcaccctcgccggccgcttcgccgagctcgtc
gatcggcttgcctcggtgctccgcgcacttgccggtccggcatcggtgaccgagtggacc
cggcagctcgggcgcgccctcgatctcctcgcagacgtgcccaccgccgacgaatggcaa
ctggcacaggcacatcgagagatctccgacgccaccgaacacggtggcaccgccgagcta
cggctcgcggacgtgcgcgccatgttggccggcagactggccggtcgacccacccgtgcg
aactttcgcaccggcgagctgaccgtgtgcaccatggtgccgatgcgctcggtgccgcac
cgagtggtggtgttgctcgggctcgacgacgaggtgttcccccgagtgggcagtatcgac
ggagacgacatcctcgcccgtgatccggctgtcggcgaacgagatattcgcagtgaggac
cgacaactcctcctcgacgcggtgatgtccgccgaggagaagctgctcttgttctacacc
ggagcagaccccgtcgacgggtcgatcaagccgcccgcgatcccgctgcgagagttgatg
gacgtgctcgaggtgacggcgggcgcaagcgtcgaacaccggcatccgctacagccgttc
gatccgcacaacttcgaagccgagcacccgttcagcttcgacaccgttgccctggccgga
gcggtctcccagcagcggacgcccgatccggtggcaccgtttctgctccacgcactacct
ccgaccgatcgcggggacgtcgagctcgccgaactgatcgcattcgtcgagaacccggtg
caggcatttctacggcaacggctcggatttcgagttccggagctcgaggacgacctggcg
gacagtctggacatcgagctggatccgttgtcccggtggaacatcggtgatcggatgctc
gcggcagtgctcgccggtggggacatcggggaattcgcggacgccgagtggcggcgcggc
accctccctccgttccatcagggccgcagagagatgtccgacatccggcagatcgtcgga
atcatcgccgacgcggccgctccctttcacgagggtccggccgagaccgtcgacgtcgcg
gtcgatctcggtgacggacgccgcctgaccggcaccgtcaccggaattcacggccgtacg
ctggcgagatcgtcctactcgcgcctggccgccaaacatcgactggccgcgtgggtgagg
ttgctggcggtggccgcatcccagccaggggagtggagcgccgtcaccatcggccgggcg
agcgggatgcgcccgcctcgtcgctctcggttgaccgccccgcgggaccccgcagccgtg
ctgcgtgacctggtggacctgcgtgatcgcggaatgacctcgccgctgccgatatcgacc
ggtaccgcgtcggcctacgcggagaagcgcttcggtggcggaaccatcgaggacggctac
gagtcggccacgtgggcgtggcggggtgacttcggcgacgggaccgaccggtcgctgcgc
tacgtccatgggtcgacactgtcgttccagacgttgctcgccgcgaccccgcatgccgac
gagaccgagccgtcgaacgagaagagccgtttcggaattctcgctcgaaagctgtgggac
ccgttgctgaccgccgagaacatggggaacgcatga
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