Rhodococcus sp. B7740: NY08_1841
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Entry
NY08_1841 CDS
T03776
Name
(GenBank) Heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rhb
Rhodococcus sp. B7740
Pathway
rhb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NY08_1841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhb03019
]
NY08_1841
03110 Chaperones and folding catalysts [BR:
rhb03110
]
NY08_1841
03029 Mitochondrial biogenesis [BR:
rhb03029
]
NY08_1841
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhb04147
]
NY08_1841
Enzymes [BR:
rhb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NY08_1841
Messenger RNA biogenesis [BR:
rhb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NY08_1841
Chaperones and folding catalysts [BR:
rhb03110
]
Heat shock proteins
HSP60 / Chaperonin
NY08_1841
Mitochondrial biogenesis [BR:
rhb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NY08_1841
Exosome [BR:
rhb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NY08_1841
Exosomal proteins of other body fluids (saliva and urine)
NY08_1841
Exosomal proteins of breast cancer cells
NY08_1841
Exosomal proteins of colorectal cancer cells
NY08_1841
Exosomal proteins of bladder cancer cells
NY08_1841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AJW39871
LinkDB
All DBs
Position
complement(1913519..1915132)
Genome browser
AA seq
537 aa
AA seq
DB search
MAKQIQFNEEARRALERGVDKLADAVKVTLGPRGRHVVLSKAFGGPTVTNDGVSIAREID
LEDPFENLGAQLVKSVATKTNDVAGDGTTTATVLAQALVRGGLKNIAAGANPIALGTGIS
KAADKVAEALLAAATPVEGKQAIAQVATVSSRDPEIGELVGEALTRVGADGVVTVEESST
LLTELSVTEGVQFDKGYLSPYFVTDVDAQEAVLEDAYVLLYREKITSLLDFLPLLEKVAE
SGKPLLIIAEDTEGEVLSTLVVNSIRKTIKAVAVKAPFFGDRRKAFLDDLAVVTAGQVIT
ADVGLSLKEAGLELLGRARRVVVTKDDTTIVDGAGTQDDIDARVGQLRREIESTDSEWDR
EKLEERLAKLSGGIAVIKVGAATETELKERKFRVDDAVAAAKAAVEEGIVPGGGSALTQA
ALALADDLGLTGDEATGVAVVRTALNAPLFWIASNAGIDGSVVVSKVAELPKGHGFNAAT
LTYGDLLADGVVDPVKVTRSAVVNAASVARMILTTESAIVEKPEEASEPAAGHGHAH
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcaaatccaattcaacgaggaagcgcgccgcgcactcgaacgcggcgtcgac
aagttggccgacgcagtcaaggtgacgctcgggccacggggacgccacgtcgtcctgtcc
aaggcattcggcggtccgaccgtcacgaacgacggtgtctcgatcgctcgtgagatcgac
ctggaggatccgttcgagaacctcggcgcgcagctggtcaagagcgtcgccaccaagacc
aacgacgtcgcaggcgacggaaccaccaccgcgacggtcctcgcgcaggcactcgtgcgc
ggcggtctgaagaacatcgccgcgggcgcgaacccgatcgcgctcggtaccggcatctcc
aaggcggccgacaaggtcgccgaggccctgctcgccgccgcaaccccggtcgagggcaag
caggcgatcgctcaggtcgccaccgtgtcctcgcgtgaccccgagatcggcgagctcgtc
ggcgaggcgctcactcgcgtcggcgcagacggcgtcgtcaccgtcgaggagtcctcgacg
ctgctgaccgagctgtcggtcaccgaaggcgtgcagttcgacaagggctacctctcgccg
tacttcgtcaccgacgtcgacgcgcaggaagcagttctcgaggacgcgtacgtcctgctg
taccgcgagaagatcacatcgcttctggactttctgcctctgctggagaaggttgccgag
agcggcaagccgttgctcatcatcgccgaggacaccgagggtgaagttctctcgacgctg
gtcgtcaactccatccgcaagacgatcaaggccgtggcggtcaaggcaccgttcttcggt
gatcgccgcaaggcgttcctcgacgatctcgcggtcgtgacggccggtcaggtcatcacc
gccgatgtgggtctgagtctcaaggaagccggcctcgagctgctcggtcgcgctcgtcgc
gtcgtcgtcaccaaggacgacacgaccatcgtcgacggtgcgggcacgcaggacgacatc
gatgcgcgcgtcggtcagctccgtcgtgagatcgagagcaccgattcggagtgggatcgc
gagaagctcgaagagcgtctggcgaagctctcgggcggcatcgcggtcatcaaggtcggc
gcagccaccgagaccgagctcaaggaacgcaagttccgcgtcgacgacgccgtggctgcg
gccaaggctgcggtcgaagagggaatcgtccccggcggcggctcggctctgactcaggca
gcgttggctctggccgacgacctgggcctgaccggtgacgaagccaccggtgtggccgtg
gtgcgcaccgcgctcaacgcaccgctgttctggatcgcctccaacgcgggcatcgacggt
tccgtcgtcgtcagcaaggtggcagaactgccgaagggtcacggattcaacgccgcgacg
ctgacgtacggcgacctgctggccgacggcgtcgtcgatccggtcaaggtgactcgctcc
gcagtggtcaacgccgcgtcggttgcacgcatgatcctgacgaccgagagtgcgatcgtg
gagaagccggaagaggcttccgagcctgctgccggacacggacacgctcactga
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