Rhodococcus sp. B7740: NY08_243
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Entry
NY08_243 CDS
T03776
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rhb
Rhodococcus sp. B7740
Pathway
rhb00300
Lysine biosynthesis
rhb00470
D-Amino acid metabolism
rhb01100
Metabolic pathways
rhb01110
Biosynthesis of secondary metabolites
rhb01120
Microbial metabolism in diverse environments
rhb01230
Biosynthesis of amino acids
Module
rhb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rhb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NY08_243
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NY08_243
Enzymes [BR:
rhb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NY08_243
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
PRC
Motif
Other DBs
NCBI-ProteinID:
AJW38276
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All DBs
Position
255619..256986
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AA seq
455 aa
AA seq
DB search
MSHRPADASEMTTLPEQVWPRNAERGEDGTVRLAGVSVTELAEQYGTPLFVVDEDDFRSR
CREMAAAFGAPERVHYASKAFLCGEIARWVADEGLSLDICSGGELAIALAAGFPADRIAM
HGNNKSVAELEAGVRAGVEHVVLDSNIEIDRLDDVAGAAGVVQDVLIRITVGVEAHTHEF
IATAHEDQKFGFSLADGSALDAVRRVFAADNLRLVGLHSHIGSQIFEVDGFELAAHKVIG
LLRDIVSEFGVDKTSQISTLDLGGGMGISYVPTDDPPPVEQLAAKLTAIVETESAAVGLP
VPTIAVEPGRAIAGPGTVTLYEVGTIKDVTVDKTTRRRYISVDGGMSDNIRTSLYQAEYD
CRLVSRTSEAEALVARVVGKHCESGDIVIKNTWMPADVGPGDLLAVAATGAYCYSMSSRY
NLLTRPAVVAVKDGHSRLILRRETIEDLLSLEVQP
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatcgcccggccgacgcgtcggagatgacgacgctgcccgagcaggtgtggccc
cgcaacgccgagcgcggtgaggacggcaccgtccgtctcgccggagtgtcggtcaccgag
ctcgcagagcagtacggcacaccgttgttcgtcgtcgacgaagacgatttccgttcgcgc
tgccgtgaaatggcggcagcgttcggggcacccgaacgagttcactacgcctccaaggct
ttcctgtgcggagagatcgcacgttgggtggccgacgaaggactctcgctcgacatctgc
tccgggggagagttggccatcgcgttggctgccggattcccggccgatcgaattgccatg
cacggcaacaacaaatcggtcgccgagctcgaggcgggcgtgcgcgcaggcgtcgaacat
gtggtactcgactccaacatcgagatcgatcgactagacgacgtcgccggagcggccggt
gtggtgcaggacgtgctgatccgcatcaccgtcggtgtcgaagcgcatacgcacgagttc
atcgccaccgcgcacgaggaccagaagttcggcttctcgctcgccgacggctcggcgctc
gacgccgtccggcgcgtgttcgctgccgacaaccttcgcctcgtgggactgcacagtcac
atcggttcgcagatattcgaggtcgacggcttcgagctggcagcgcacaaggtcatcggg
ctgctccgagacatcgtctcggagttcggcgtcgacaagacctcccagatctcgacgctg
gatctcggtggcggcatgggtatttcgtacgtgccgaccgacgacccgccgccggtggag
cagctcgcggcgaagttgactgccatcgtggagacggaatccgccgcagtaggactgcct
gtcccgacgatcgccgtggaacccggccgcgccatcgccggaccgggcaccgtcacgctc
tacgaggtcggcaccatcaaggacgtcaccgtcgacaagacgacgcgcaggcgctacatc
agcgtcgacggcggcatgagcgacaacatccgaacctcgctgtaccaggccgaatacgat
tgccggctggtctcgcgcacgagcgaagccgaggcgctcgtggctcgggtggtcggaaag
cattgtgagagtggcgacatcgtcatcaagaacacgtggatgccggcggacgtcggcccg
ggtgacctgctcgcggtagcggccaccggggcctactgctactccatgtccagtcgctac
aacctgctgacgcggcccgctgtggttgcggtcaaggacgggcattcgcgcctgatcctg
cggcgggaaaccatcgaagatctgctcagcttggaggttcagccatga
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