KEGG   Rhodococcus sp. B7740: NY08_243
Entry
NY08_243          CDS       T03776                                 
Name
(GenBank) Diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
rhb  Rhodococcus sp. B7740
Pathway
rhb00300  Lysine biosynthesis
rhb00470  D-Amino acid metabolism
rhb01100  Metabolic pathways
rhb01110  Biosynthesis of secondary metabolites
rhb01120  Microbial metabolism in diverse environments
rhb01230  Biosynthesis of amino acids
Module
rhb_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rhb00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    NY08_243
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    NY08_243
Enzymes [BR:rhb01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     NY08_243
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N PRC
Other DBs
NCBI-ProteinID: AJW38276
LinkDB
Position
255619..256986
AA seq 455 aa
MSHRPADASEMTTLPEQVWPRNAERGEDGTVRLAGVSVTELAEQYGTPLFVVDEDDFRSR
CREMAAAFGAPERVHYASKAFLCGEIARWVADEGLSLDICSGGELAIALAAGFPADRIAM
HGNNKSVAELEAGVRAGVEHVVLDSNIEIDRLDDVAGAAGVVQDVLIRITVGVEAHTHEF
IATAHEDQKFGFSLADGSALDAVRRVFAADNLRLVGLHSHIGSQIFEVDGFELAAHKVIG
LLRDIVSEFGVDKTSQISTLDLGGGMGISYVPTDDPPPVEQLAAKLTAIVETESAAVGLP
VPTIAVEPGRAIAGPGTVTLYEVGTIKDVTVDKTTRRRYISVDGGMSDNIRTSLYQAEYD
CRLVSRTSEAEALVARVVGKHCESGDIVIKNTWMPADVGPGDLLAVAATGAYCYSMSSRY
NLLTRPAVVAVKDGHSRLILRRETIEDLLSLEVQP
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgtcccatcgcccggccgacgcgtcggagatgacgacgctgcccgagcaggtgtggccc
cgcaacgccgagcgcggtgaggacggcaccgtccgtctcgccggagtgtcggtcaccgag
ctcgcagagcagtacggcacaccgttgttcgtcgtcgacgaagacgatttccgttcgcgc
tgccgtgaaatggcggcagcgttcggggcacccgaacgagttcactacgcctccaaggct
ttcctgtgcggagagatcgcacgttgggtggccgacgaaggactctcgctcgacatctgc
tccgggggagagttggccatcgcgttggctgccggattcccggccgatcgaattgccatg
cacggcaacaacaaatcggtcgccgagctcgaggcgggcgtgcgcgcaggcgtcgaacat
gtggtactcgactccaacatcgagatcgatcgactagacgacgtcgccggagcggccggt
gtggtgcaggacgtgctgatccgcatcaccgtcggtgtcgaagcgcatacgcacgagttc
atcgccaccgcgcacgaggaccagaagttcggcttctcgctcgccgacggctcggcgctc
gacgccgtccggcgcgtgttcgctgccgacaaccttcgcctcgtgggactgcacagtcac
atcggttcgcagatattcgaggtcgacggcttcgagctggcagcgcacaaggtcatcggg
ctgctccgagacatcgtctcggagttcggcgtcgacaagacctcccagatctcgacgctg
gatctcggtggcggcatgggtatttcgtacgtgccgaccgacgacccgccgccggtggag
cagctcgcggcgaagttgactgccatcgtggagacggaatccgccgcagtaggactgcct
gtcccgacgatcgccgtggaacccggccgcgccatcgccggaccgggcaccgtcacgctc
tacgaggtcggcaccatcaaggacgtcaccgtcgacaagacgacgcgcaggcgctacatc
agcgtcgacggcggcatgagcgacaacatccgaacctcgctgtaccaggccgaatacgat
tgccggctggtctcgcgcacgagcgaagccgaggcgctcgtggctcgggtggtcggaaag
cattgtgagagtggcgacatcgtcatcaagaacacgtggatgccggcggacgtcggcccg
ggtgacctgctcgcggtagcggccaccggggcctactgctactccatgtccagtcgctac
aacctgctgacgcggcccgctgtggttgcggtcaaggacgggcattcgcgcctgatcctg
cggcgggaaaccatcgaagatctgctcagcttggaggttcagccatga

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